RNA–Protein interactions for RNA: ENST00000339997.8

RTN3-202, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 4,886 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-202ENST00000339997 YRDCQ86U90 279 aaKnown RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 OR1M1Q8NGA1 313 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 OR5AP2Q8NGF4 316 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 WNT2BQ93097 391 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 LHX4Q969G2 390 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 ANKRD9Q96BM1 317 aaPredicted RBP7.89□□□□□ -1.15
RTN3-202ENST00000339997 ETV7Q9Y603 341 aa7.89□□□□□ -1.15
RTN3-202ENST00000339997 PLSCR5A0PG75 271 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 C1QAP02745 245 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 HPXP02790 462 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 TNFSF4P23510 183 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 CD38P28907 300 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 KHDC1LQ5JSQ8 128 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 DEFB108BQ8NET1 73 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 GPR32P1Q8NGA4 272 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 OR2G2Q8NGZ5 317 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 C16orf52Q8NHV5 167 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 SMIM4Q8WVI0 70 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 SLAMF6Q96DU3 332 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 POM121Q96HA1 1249 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 A4GNTQ9UNA3 340 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 KPTNQ9Y664 436 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 LY75O60449 1722 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 RFPL4AA6NLU0 287 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 RFPL4AL1F8VTS6 287 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 PCMT1P22061 227 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 F2RL1P55085 397 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 HBG1P69891 147 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 HBG2P69892 147 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 OR2F1Q13607 317 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 ZNF595Q8IYB9 648 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
RTN3-202ENST00000339997 EID2BQ96D98 161 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 UHRF2Q96PU4 802 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 CLCF1Q9UBD9 225 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 CD207Q9UJ71 328 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.88□□□□□ -1.15
RTN3-202ENST00000339997 A0A1W2PNV4 684 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 A8MVM7 634 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 ONECUT2O95948 504 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 AADACP22760 399 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 OR1D5P58170 312 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 RPL11P62913 178 aaKnown RBP7.88□□□□□ -1.15
RTN3-202ENST00000339997 C19orf35Q6ZS72 473 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 PPP1R3BQ86XI6 285 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 PRSS35Q8N3Z0 413 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 GVQW1Q8N7I0 195 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 OR4C3Q8NH37 302 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 OR51F2Q8NH61 342 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 RHBDD1Q8TEB9 315 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 CYSLTR2Q9NS75 346 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 ZNF355PQ9NSJ1 428 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 MBD1Q9UIS9 605 aaPredicted RBP7.88□□□□□ -1.15
RTN3-202ENST00000339997 LAMB1P07942 1786 aa7.88□□□□□ -1.15
RTN3-202ENST00000339997 ADAM10O14672 748 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 OR2J2O76002 312 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 GSTP1P09211 210 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 CD1CP29017 333 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 HOXA1P49639 335 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 RPL27P61353 136 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 HLXQ14774 488 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 PCK2Q16822 640 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PHYHD1Q5SRE7 291 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 THSD4Q6ZMP0 1018 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 DBX2Q6ZNG2 339 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 TCTE3Q8IZS6 198 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 C1orf87Q8N0U7 546 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 EID2Q8N6I1 236 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 GABARAPL1Q9H0R8 117 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 DLL4Q9NR61 685 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 TNRC6CQ9HCJ0 1690 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 ADAMTSL1Q8N6G6 1762 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 WNK2Q9Y3S1 2297 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 BTBD17A6NE02 478 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SEC14L6B5MCN3 397 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SPRY1O43609 319 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 ADAP1O75689 374 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 OR5H8P0DN80 308 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PSMB3P49720 205 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 WNT3P56703 355 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 KIAA0040Q15053 153 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 MSMO1Q15800 293 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 ETFRF1Q6IPR1 90 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PRR27Q6MZM9 219 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 C16orf47Q6ZP98 133 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 WDR5BQ86VZ2 330 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 ADGRL4Q9HBW9 690 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 ASIC5Q9NY37 505 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 MCTS1Q9ULC4 181 aaKnown RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 PLCE1Q9P212 2302 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.87□□□□□ -1.15
RTN3-202ENST00000339997 CDC42EP2O14613 210 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 TOX4O94842 621 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PEX11BO96011 259 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 IGF2P01344 180 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 HBE1P02100 147 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 SFTA3P0C7M3 94 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 THBS3P49746 956 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 PIGPP57054 158 aa7.87□□□□□ -1.15
RTN3-202ENST00000339997 KRTDAPP60985 99 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms