RNA–Protein interactions for RNA: ENST00000339950.4

USP1-201, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP1, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-201ENST00000339950 CNTNAP3BQ96NU0 1288 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 PHB2Q99623 299 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 GLS2Q9UI32 602 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 GPR160Q9UJ42 338 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 RARRES3Q9UL19 164 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 HS3ST3A1Q9Y663 406 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 A0A1B0GUH1 482 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 D6RAR5 112 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 LYPD3O95274 346 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 GAAP10253 952 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 FAHP16930 419 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 ZNF16P17020 682 aaPredicted RBP10.69□□□□□ -0.7
USP1-201ENST00000339950 KLK2P20151 261 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 LAP3P28838 519 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 ACACAQ13085 2346 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 MFAP5Q13361 173 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 SLC35D3Q5M8T2 416 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 RAB3CQ96E17 227 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 C8orf33Q9H7E9 229 aaPredicted RBP10.69□□□□□ -0.7
USP1-201ENST00000339950 HIF3AQ9Y2N7 669 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 FAM96BQ9Y3D0 163 aa10.69□□□□□ -0.7
USP1-201ENST00000339950 ANKRD20A5PA0PJZ0 165 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 H7C417 338 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 QDPRP09417 244 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 CD96P40200 585 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 PEA15Q15121 130 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 TAF9Q16594 264 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 RNF144BQ7Z419 303 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 YRDCQ86U90 279 aaKnown RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 OR5D14Q8NGL3 314 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 OR52N5Q8NH56 324 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 MTFP1Q9UDX5 166 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 DKKL1Q9UK85 242 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 SLC22A23A1A5C7 686 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 BCAT2O15382 392 aaPredicted RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 TNFSF14O43557 240 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 TLX3O43711 291 aaPredicted RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 IL33O95760 270 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 GLULP15104 373 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 ZNF141Q15928 474 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 ADGRG3Q86Y34 549 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 SCARB1Q8WTV0 552 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 CTHRC1Q96CG8 243 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 TMEM59Q9BXS4 323 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 C1orf198Q9H425 327 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 PLEKHJ1Q9NW61 149 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 CSAG2Q9Y5P2 127 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 WDFY4Q6ZS81 3184 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 MST1P26927 711 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 DUSP1P28562 367 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 RBMXP38159 391 aaKnown RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 SLC6A8P48029 635 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 RNF4P78317 190 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 ADGRE4PQ86SQ3 457 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 CBLN2Q8IUK8 224 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 ADAD2Q8NCV1 583 aaKnown RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 ARL11Q969Q4 196 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 FOXRED1Q96CU9 486 aaPredicted RBP10.68□□□□□ -0.7
USP1-201ENST00000339950 DNTTIP1Q9H147 329 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 PCNX3Q9H6A9 2034 aa10.68□□□□□ -0.7
USP1-201ENST00000339950 A6NCN8 305 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 GPR31O00270 319 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 APOC1P02654 83 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 GIPP09681 153 aaPredicted RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 AGTR1P30556 359 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 TMEM244Q5VVB8 128 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 H1FNTQ75WM6 255 aaPredicted RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 GRINAQ7Z429 371 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 PELOQ9BRX2 385 aaKnown RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 SCPEP1Q9HB40 452 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 GPR173Q9NS66 373 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 LRRK1Q38SD2 2015 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 SLC17A2O00624 439 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 SOCS1O15524 211 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 XRCC2O43543 280 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 CD53P19397 219 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 GALP22466 123 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 GUSBP11Q6P575 273 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 P4HA3Q7Z4N8 544 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 ASB5Q8WWX0 329 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 DYRK2Q92630 601 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 FBXO17Q96EF6 278 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 C14orf79Q96F83 325 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 TXNIPQ9H3M7 391 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 MRPL22Q9NWU5 206 aaKnown RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 PTTG3PQ9NZH4 202 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 OPN4Q9UHM6 478 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 URGCP-MRPS24S4R325 110 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 RPS10-NUDT3A0A1W2PQS6 291 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 RPS10P46783 165 aaKnown RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 OR3A4PP47883 348 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 SLC26A5P58743 744 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 RAB11FIP2Q7L804 512 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 C15orf40Q8WUR7 153 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 ADAT3Q96EY9 351 aaPredicted RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 ZNF845Q96IR2 970 aaPredicted RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 GPHA2Q96T91 129 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 CMSS1Q9BQ75 279 aaKnown RBP10.67□□□□□ -0.7
USP1-201ENST00000339950 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
USP1-201ENST00000339950 C5orf67F2Z3F1 127 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms