RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 ZNF511Q8NB15 262 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 OR2AK2Q8NG84 335 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 PRRG2O14669 202 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 GABRB1P18505 474 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 KIR2DL3P43628 341 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 SLC35A1P78382 337 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 C17orf67Q0P5P2 114 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 TRDV1A0A1B0GX56 115 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 C1orf105O95561 183 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CTXN2P0C2S0 81 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MEOX2P50222 304 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 ERVS71-1P61550 626 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CCL14Q16627 93 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 ZFPM2Q8WW38 1151 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 HDAC8Q9BY41 377 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 FLVCR2Q9UPI3 526 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 NTNG1Q9Y2I2 539 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 TMEM218A2RU14 115 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 T-ENOLP0DO92 83 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 BAP18Q8IXM2 172 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 ATP5SQ99766 215 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 RNF167Q9H6Y7 350 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 TRIOBPQ9H2D6 2365 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MYOFQ9NZM1 2061 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 GUSBP08236 651 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 HIST1H1TP22492 207 aaPredicted RBP11.73□□□□□ -0.53
USP47-202ENST00000339865 CHRNA7P36544 502 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 ZCCHC14Q8WYQ9 949 aaKnown RBP11.73□□□□□ -0.53
USP47-202ENST00000339865 ZIC5Q96T25 663 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 ABCC6O95255 1503 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 KMT2EQ8IZD2 1858 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MELTFP08582 738 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 SLC38A9Q8NBW4 561 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 OR52B4Q8NGK2 314 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 MEGF10Q96KG7 1140 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 C12orf42Q96LP6 360 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 CIB3Q96Q77 187 aaPredicted RBP11.73□□□□□ -0.53
USP47-202ENST00000339865 SPACA5Q96QH8 159 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 SORT1Q99523 831 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 TMEM9BQ9NQ34 198 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 SLC17A4Q9Y2C5 497 aa11.73□□□□□ -0.53
USP47-202ENST00000339865 FZD6O60353 706 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 SEMA7AO75326 666 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 SLC25A5P05141 298 aaKnown RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 OR4E1P0C645 316 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 NID1P14543 1247 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 COMPP49747 757 aaPredicted RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 RHOBP62745 196 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 TMEM251Q8N6I4 163 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 OR1N2Q8NGR9 330 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 TMEM255BQ8WV15 326 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 MOGAT1Q96PD6 335 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 MMP26Q9NRE1 261 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ZNF487B1APH4 448 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 CYR61O00622 381 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 TNFRSF10CO14798 259 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 KLK10O43240 276 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 XRCC2O43543 280 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 CPMP14384 443 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ARRB2P32121 409 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 TMEM267Q0VDI3 215 aaPredicted RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 DEFB109BQ30KR1 87 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 TMEFF1Q8IYR6 380 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 BOD1Q96IK1 185 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 TFAP2AP05549 437 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ZP3P21754 424 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 CHST14Q8NCH0 376 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 A0A0U1RQS6 177 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 C9orf172C9J069 976 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 RBP4P02753 201 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 CD82P27701 267 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 RPEL1Q2QD12 228 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 DPY19L2P2Q6ZN68 376 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 PLRG1O43660 514 aaKnown RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 CRISP2P16562 243 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 P2RY2P41231 377 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 NPWQ8N729 165 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 OR52E1Q8NGJ3 308 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ZNF764Q96H86 408 aaPredicted RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 ZNF814B7Z6K7 855 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 PRTGQ2VWP7 1150 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ALKBH6Q3KRA9 238 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 WFDC8Q8IUA0 241 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 ADAT3Q96EY9 351 aaPredicted RBP11.72□□□□□ -0.53
USP47-202ENST00000339865 C1QTNF6Q9BXI9 259 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 HSPB8Q9UJY1 196 aa11.72□□□□□ -0.53
USP47-202ENST00000339865 RRADP55042 308 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 FOXK2Q01167 660 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 BPIFA4PQ86YQ2 179 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 SCMH1Q96GD3 660 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 SELEP16581 610 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 GLRA1P23415 457 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 PCSK6P29122 969 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 C21orf58P58505 322 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 KIR2DS3Q14952 304 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 OR1C1Q15619 314 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 ABI3BPQ7Z7G0 1075 aa11.71□□□□□ -0.53
USP47-202ENST00000339865 TMEM25Q86YD3 366 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms