RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 ALKBH4Q9NXW9 302 aa9.59□□□□□ -0.87
RTN3-201ENST00000338850 PFDN2Q9UHV9 154 aa9.59□□□□□ -0.87
RTN3-201ENST00000338850 B3GALT5Q9Y2C3 310 aa9.59□□□□□ -0.87
RTN3-201ENST00000338850 FREM3P0C091 2139 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 A0A1B0GTH9 108 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 LOC107986453A0A1B0GWG9 222 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 CEACAM18A8MTB9 384 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 H0YC42 278 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 TIAF1O95411 115 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 OR4E1P0C645 316 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 FOLR1P15328 257 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 ZNF823P16415 610 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 TLE1Q04724 770 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 MFGE8Q08431 387 aaPredicted RBP9.58□□□□□ -0.88
RTN3-201ENST00000338850 ACTBL2Q562R1 376 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 H1FNTQ75WM6 255 aaPredicted RBP9.58□□□□□ -0.88
RTN3-201ENST00000338850 MARCH3Q86UD3 253 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 PPP1R3BQ86XI6 285 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 CCDC54Q8NEL0 328 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 OR1L3Q8NH93 324 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 VN1R1Q9GZP7 353 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 ATG5Q9H1Y0 275 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 EXO5Q9H790 373 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 BEX1Q9HBH7 125 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 CHST11Q9NPF2 352 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 RDH8Q9NYR8 311 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 OR52A1Q9UKL2 312 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 KCNMB2Q9Y691 235 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 NBASA2RRP1 2371 aa9.58□□□□□ -0.88
RTN3-201ENST00000338850 PCNX3Q9H6A9 2034 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 A0A0B4J2A0 478 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 LOC102725191A0A1B0GVB3 256 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ZNF736B4DX44 427 aaPredicted RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 NPIPA5E9PKD4 350 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 C11orf98E9PRG8 122 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 EIF1AYO14602 144 aaKnown RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 TOXO94900 526 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 KDM4BO94953 1096 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 WDPCPO95876 746 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 HLA-DQA2P01906 255 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 CD3DP04234 171 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 CHRM2P08172 466 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 NR2C1P13056 603 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ZNF35P13682 527 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 NAT1P18440 290 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ENPP1P22413 925 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 CASRP41180 1078 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 EIF1AXP47813 144 aaKnown RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 DNASE1L1P49184 302 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ARL4DP49703 201 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 TAS2R31P59538 309 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 PMPCAQ10713 525 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 PLA2G7Q13093 441 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 KCNAB1Q14722 419 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 NSDHLQ15738 373 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 KCNMB1Q16558 191 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ZNF260Q3ZCT1 412 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 VWA2Q5GFL6 755 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 LY6G6FQ5SQ64 297 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 RHBDD2Q6NTF9 364 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 FAAP20Q6NZ36 180 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 NHLRC1Q6VVB1 395 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 SLC25A42Q86VD7 318 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 STPG2Q8N412 459 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 SLC22A24Q8N4F4 322 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 KCNRGQ8N5I3 272 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 METTL27Q8N6F8 245 aaPredicted RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 OR5M1Q8NGP8 315 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 LHFPL5Q8TAF8 219 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 FAM46BQ96A09 425 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ZNF501Q96CX3 271 aaPredicted RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 DDIT4LQ96D03 193 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 ABHD17AQ96GS6 310 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 MRGPRX4Q96LA9 322 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 CHIAQ9BZP6 476 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.57□□□□□ -0.88
RTN3-201ENST00000338850 ZNF71Q9NQZ8 489 aaPredicted RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 TAS2R4Q9NYW5 299 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 SHPKQ9UHJ6 478 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 GPN3Q9UHW5 284 aaPredicted RBP9.57□□□□□ -0.88
RTN3-201ENST00000338850 RARRES3Q9UL19 164 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 PADI1Q9ULC6 663 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 NPIPA1Q9UND3 350 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 SLC22A13Q9Y226 551 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 SLC5A6Q9Y289 635 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 LRRK2Q5S007 2527 aa9.57□□□□□ -0.88
RTN3-201ENST00000338850 OR14I1A6ND48 311 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 CYSRT1A8MQ03 144 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 MS4A18H0YCH9 400 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 RAB27BO00194 218 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 GOSR2O14653 212 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 ARPC5O15511 151 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 RLN1P04808 185 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 GSTP1P09211 210 aaKnown RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 PTHLHP12272 177 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 CCL1P22362 96 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 BDKRB2P30411 391 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 NUP62P37198 522 aaPredicted RBP9.56□□□□□ -0.88
RTN3-201ENST00000338850 OR1D4P47884 311 aa9.56□□□□□ -0.88
RTN3-201ENST00000338850 EFNA3P52797 238 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms