RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 BOD1Q96IK1 185 aa12.82□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF75AQ96N20 296 aa12.82□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SLITRK2Q9H156 845 aa12.82□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF275Q9NSD4 429 aaPredicted RBP12.82□□□□□ -0.36
CDK5RAP3-201ENST00000338399 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
CDK5RAP3-201ENST00000338399 A0A075B6Q4 140 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MSTNO14793 375 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 IGLV3-1P01715 115 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MAS1P04201 325 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 HOXB1P14653 301 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CCL1P22362 96 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CASP6P55212 293 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SLC25A35Q3KQZ1 300 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ASPHD2Q6ICH7 369 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DOK3Q7L591 496 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 WDR31Q8NA23 367 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OR1J2Q8NGS2 313 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OR2AE1Q8NHA4 323 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SGK3Q96BR1 496 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 FGGYQ96C11 551 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 POM121L2Q96KW2 1035 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 GFI1Q99684 422 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 VKORC1Q9BQB6 163 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SLC30A2Q9BRI3 323 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SP140LQ9H930 580 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 TAS2R4Q9NYW5 299 aa12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF629Q9UEG4 869 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ARPC4-TTLL3A0A0A6YYG9 625 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CTDSP2O14595 271 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PDCD5O14737 125 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SERPINA5P05154 406 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 APLNRP35414 380 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 IDNKQ5T6J7 187 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SFXN4Q6P4A7 337 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 LRRTM1Q86UE6 522 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ADAT3Q96EY9 351 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 WBP1Q96G27 269 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DMRTA2Q96SC8 542 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PIGMQ9H3S5 423 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SMURF1Q9HCE7 757 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CRNNQ9UBG3 495 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OSGIN2Q9Y236 505 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MEMO1Q9Y316 297 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ITPR1Q14643 2758 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 A8MXE2 369 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 AGFG2O95081 481 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CELA3BP08861 270 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ADRA2CP18825 462 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CA7P43166 264 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 TMEM211Q6ICI0 200 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MYPOPQ86VE0 399 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 LIX1LQ8IVB5 337 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SLC30A7Q8NEW0 376 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 OR14K1Q8NGZ2 314 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 AP3S1Q92572 193 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 RND1Q92730 232 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 REEP6Q96HR9 211 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CNTNAP3BQ96NU0 1288 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 C1QTNF6Q9BXI9 259 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 C1QTNF5Q9BXJ0 243 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CNTNAP3Q9BZ76 1288 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CKLFQ9UBR5 152 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DAPK2Q9UIK4 370 aa12.8□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MYO7BQ6PIF6 2116 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 NBEAQ8NFP9 2946 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 NOTOA8MTQ0 251 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 RGS5O15539 181 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF14P17017 642 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 IGFBP3P17936 291 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 IL32P24001 234 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 GNALP38405 381 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 IDH3GP51553 393 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DYNC1I2Q13409 638 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MOGQ16653 247 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 GLYATL3Q5SZD4 288 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 COLCA1Q6ZS62 124 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 MRGPRGQ86SM5 289 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 CROCCP3Q8IVE0 287 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 SERPINA12Q8IW75 414 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 C17orf78Q8N4C9 275 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PAQR4Q8N4S7 273 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PARP16Q8N5Y8 322 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PLPP7Q8NBV4 271 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DNAAF1Q8NEP3 725 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 FOXJ3Q9UPW0 622 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 PEX16Q9Y5Y5 336 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 V9GY05 133 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 COL6A6A6NMZ7 2263 aa12.79□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ANXA2P2A6NMY6 339 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 DHRS3O75911 302 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 EPXP11678 715 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF12P17014 697 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZNF20P17024 532 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 FSTP19883 344 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 S100A5P33763 92 aa12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-201ENST00000338399 ZCCHC4Q9H5U6 513 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms