RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PSG7Q13046 419 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 MSMPQ1L6U9 139 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 TP53I3Q53FA7 332 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF684Q5T5D7 378 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 LIPNQ5VXI9 398 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 LAIR2Q6ISS4 152 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 TMPRSS11AQ6ZMR5 421 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 SSX6Q7RTT6 188 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PRSS45Q7RTY3 260 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 RFLNBQ8N5W9 214 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ITFG2Q969R8 447 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 SGK3Q96BR1 496 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 MBD6Q96DN6 1003 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 SIGLEC11Q96RL6 698 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 VRK1Q99986 396 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ALG8Q9BVK2 526 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 JAM3Q9BX67 310 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 CACNG6Q9BXT2 260 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 RAB1BQ9H0U4 201 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 OPA3Q9H6K4 179 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ERVK13-1Q9NX77 482 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 CGGBP1Q9UFW8 167 aaPredicted RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 ZNF391Q9UJN7 358 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 PURGQ9UJV8 347 aaKnown RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 GTF2A1LQ9UNN4 478 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 DIMT1Q9UNQ2 313 aaKnown RBP10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 SNX5Q9Y5X3 404 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 R4GMQ9 66 aa10.21□□□□□ -0.77
SPTLC1-202ENST00000337841 FLNBO75369 2602 aaKnown RBP10.21□□□□□ -0.78
SPTLC1-202ENST00000337841 HEATR1Q9H583 2144 aaKnown RBP10.21□□□□□ -0.78
SPTLC1-202ENST00000337841 GGT3PA6NGU5 568 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 PRR32B1ATL7 298 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 ADRA2AP08913 450 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 CCDC159P0C7I6 412 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 KITLGP21583 273 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 DDOSTP39656 456 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 PPOXP50336 477 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 GBX2P52951 348 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 OR12D2P58182 307 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 MRPL28Q13084 256 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 GK2Q14410 553 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 HLXQ14774 488 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 DEFB113Q30KQ7 82 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 SNAI3Q3KNW1 292 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 CDONQ4KMG0 1287 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 ZMAT1Q5H9K5 638 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 GLYATL3Q5SZD4 288 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 OR2T2Q6IF00 324 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 C11orf71Q6IPW1 123 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 SYS1Q8N2H4 156 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 HAVCR2Q8TDQ0 301 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 SPRYD4Q8WW59 207 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 REPIN1Q9BWE0 567 aaKnown RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 PBOV1Q9GZY1 135 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 POFUT1Q9H488 388 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 MOB1AQ9H8S9 216 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF701Q9NV72 531 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 FAM206AQ9NX38 181 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 OR52A1Q9UKL2 312 aa10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 CAB39Q9Y376 341 aaPredicted RBP10.2□□□□□ -0.78
SPTLC1-202ENST00000337841 A0A0U1RQV5 110 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 CD300LBA8K4G0 201 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 H7C417 338 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 SLC1A7O00341 560 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 PAX1P15863 534 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 CDKN1AP38936 164 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ALDH3B1P43353 468 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ETV1P50549 477 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF81P51508 661 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF92Q03936 586 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 RBM48Q5RL73 367 aaKnown RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 BCL2L15Q5TBC7 163 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 AHSA2Q719I0 299 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ELMOD2Q8IZ81 293 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 LRRC75A-AS1Q8N1F1 130 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ZNF786Q8N393 782 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 KLHL36Q8N4N3 616 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 OR8G5Q8NG78 346 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 OR2AE1Q8NHA4 323 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 NEU4Q8WWR8 484 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 RORBQ92753 470 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 RNF166Q96A37 237 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 SPSB4Q96A44 273 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 REEP6Q96HR9 211 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 C4orf36Q96KX1 117 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 DIRC2Q96SL1 478 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 YTHDF1Q9BYJ9 559 aaKnown RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 BARX1Q9HBU1 254 aaPredicted RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 TMEM100Q9NV29 134 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 MYEF2Q9P2K5 600 aaKnown RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 NUFIP1Q9UHK0 495 aaKnown RBP10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 BLOC1S6Q9UL45 172 aa10.19□□□□□ -0.78
SPTLC1-202ENST00000337841 ROS1P08922 2347 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 UNC79Q9P2D8 2635 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 C5orf63A6NC05 138 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 IQCF6A8MYZ5 107 aa10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 SRSF10O75494 262 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 MTRF1O75570 445 aaKnown RBP10.18□□□□□ -0.78
SPTLC1-202ENST00000337841 PNPP00491 289 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms