RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 LAIR1Q6GTX8 287 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 THSD4Q6ZMP0 1018 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 C10orf111Q8N326 155 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 RDH5Q92781 318 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 MAP6Q96JE9 813 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 DYNLRB1Q9NP97 96 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 UMAD1C9J7I0 102 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
RTN4-202ENST00000337526 C17orf47Q8NEP4 570 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 OR8D4Q8NGM9 314 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 ABHD1Q96SE0 405 aa12.42□□□□□ -0.42
RTN4-202ENST00000337526 LRP5LA4QPB2 252 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 E5RGE8 158 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 CDC42EP2O14613 210 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 YKT6O15498 198 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 SPINT2O43291 252 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 LRP3O75074 770 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 GLSO94925 669 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 CD37P11049 281 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 NFYBP25208 207 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 MVDP53602 400 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 C21orf58P58505 322 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 TMEM268Q5VZI3 342 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 RTN4IP1Q8WWV3 396 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 GNPNAT1Q96EK6 184 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 SIRT3Q9NTG7 399 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 AK3Q9UIJ7 227 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 NSG2Q9Y328 171 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 OR6C68A6NDL8 312 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 DCTN6O00399 190 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 ELLP55199 621 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 ZNF85Q03923 595 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 EDDM3AQ14507 147 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 TMEM229BQ8NBD8 167 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 HPSE2Q8WWQ2 592 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 FBXO34Q9NWN3 711 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 GAB2Q9UQC2 676 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 HLA-DOBP13765 273 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 RAB4AP20338 218 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 ZNF121P58317 390 aaPredicted RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 TMEM128Q5BJH2 165 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 INTS12Q96CB8 462 aaKnown RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 OR2A5Q96R48 311 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 SUCNR1Q9BXA5 334 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 EXOGQ9Y2C4 368 aaKnown RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 FAM166BA8MTA8 275 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 DHHO43323 396 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 OR2C1O95371 312 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 RNF4P78317 190 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 HAGHQ16775 308 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.41□□□□□ -0.42
RTN4-202ENST00000337526 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.41□□□□□ -0.42
RTN4-202ENST00000337526 ARHGEF39Q8N4T4 335 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 DTWD2Q8NBA8 298 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 LRP12Q9Y561 859 aa12.41□□□□□ -0.42
RTN4-202ENST00000337526 SLC25A1P53007 311 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 RRADP55042 308 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 TOMM34Q15785 309 aaPredicted RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 ZNF239Q16600 458 aaKnown RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 ZNF628Q5EBL2 1059 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 PRSS41Q7RTY9 318 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 ZNF768Q9H5H4 540 aaKnown RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 CXCL13O43927 109 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 CISD3P0C7P0 127 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 HOXB3P14651 431 aaPredicted RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 ACKR3P25106 362 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 FOXF1Q12946 379 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 ARRDC1Q8N5I2 433 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 TMEM178AQ8NBL3 297 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 OR11L1Q8NGX0 322 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 ADGRL4Q9HBW9 690 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 GHRLQ9UBU3 117 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 MTFP1Q9UDX5 166 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 FBXO4Q9UKT5 387 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 PCDHB10Q9UN67 800 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 AHCTF1Q8WYP5 2266 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 RFPL4AA6NLU0 287 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 RFPL4AL1F8VTS6 287 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 GLB1P16278 677 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 OR2B8PP59922 312 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 CLN3Q13286 438 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 TCTN1Q2MV58 587 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 WDR38Q5JTN6 314 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 HIST2H3AQ71DI3 136 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 TP53I13Q8NBR0 393 aaPredicted RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 C11orf40Q8WZ69 217 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 TTC9Q92623 222 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 MBD1Q9UIS9 605 aaPredicted RBP12.4□□□□□ -0.42
RTN4-202ENST00000337526 FOXJ3Q9UPW0 622 aa12.4□□□□□ -0.42
RTN4-202ENST00000337526 MEIKINA0A087WXM9 373 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 BCL2L11O43521 198 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 SCAF4O95104 1147 aaKnown RBP12.39□□□□□ -0.43
RTN4-202ENST00000337526 PIGPP57054 158 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 TBC1D28Q2M2D7 210 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 LCN15Q6UWW0 184 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 OR5AS1Q8N127 324 aa12.39□□□□□ -0.43
RTN4-202ENST00000337526 C4orf45Q96LM5 186 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms