RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 AKR7LQ8NHP1 331 aa7.81□□□□□ -1.16
SNCA-201ENST00000336904 POTEKPQ9BYX7 375 aa7.81□□□□□ -1.16
SNCA-201ENST00000336904 FOXJ2Q9P0K8 574 aa7.81□□□□□ -1.16
SNCA-201ENST00000336904 U3KQ87 197 aa7.81□□□□□ -1.16
SNCA-201ENST00000336904 A0A1B0GUH1 482 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 AQP7P3A6NL99 342 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 CENPBD1B2RD01 187 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ZNF736B4DX44 427 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 SDCBPO00560 298 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 CRTAPO75718 401 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 HTR3BO95264 441 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 AKR1C4P17516 323 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SERPINA2P20848 420 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 VAMP1P23763 118 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 HRH1P35367 487 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SUCLG1P53597 346 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 SUMO3P55854 103 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 CXADRP78310 365 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 MFSD13AQ14CX5 517 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SNAI3Q3KNW1 292 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 HACD4Q5VWC8 232 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 LINC00696Q6ZRV3 163 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 VASH2Q86V25 355 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 WDR5BQ86VZ2 330 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 C20orf196Q8IYI0 205 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ELMOD2Q8IZ81 293 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 BEST3Q8N1M1 668 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 GPX8Q8TED1 209 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 PGAM5Q96HS1 289 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 OXGR1Q96P68 337 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 RANBP3Q9H6Z4 567 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 PNRC2Q9NPJ4 139 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 PLEK2Q9NYT0 353 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 PRR14LQ5THK1 2151 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 TMEM265A0A087WTH1 108 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 IGKV1-9A0A0C4DH69 117 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 A0A1W2PNU3 283 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 LNP1A1A4G5 178 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 RAB27BO00194 218 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 NTN3O00634 580 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 SIGLEC5O15389 551 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SULT1B1O43704 296 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ANGPTL7O43827 346 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 AQP8O94778 261 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 LDOC1O95751 146 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 UBCP0CG48 685 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 CCL2P13500 99 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 RAB3AP20336 220 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 MMP16P51512 607 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SIGLEC14Q08ET2 396 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 IL11RAQ14626 422 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ZBTB37Q5TC79 503 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ZNF626Q68DY1 528 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SLC25A47Q6Q0C1 308 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 KCTD9Q7L273 389 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 PPP1R32Q7Z5V6 425 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ZNF584Q8IVC4 421 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 FADS6Q8N9I5 356 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 ADAD2Q8NCV1 583 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 ABHD3Q8WU67 409 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 CT55Q8WUE5 264 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 OIT3Q8WWZ8 545 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 LYZL4Q96KX0 146 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 C7orf50Q9BRJ6 194 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 NPDC1Q9NQX5 325 aaPredicted RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 GLTPQ9NZD2 209 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 SCP2D1Q9UJQ7 156 aa7.8□□□□□ -1.16
SNCA-201ENST00000336904 TNRC6BQ9UPQ9 1833 aaKnown RBP7.8□□□□□ -1.16
SNCA-201ENST00000336904 CEP250Q9BV73 2442 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 A0A1W2PNV4 684 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 TMEM82A0PJX8 343 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 FAM166BA8MTA8 275 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 RAD51DO75771 328 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CER1O95813 267 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CSF1P09603 554 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 HGFACQ04756 655 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ZFP36L1Q07352 338 aaKnown RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 OPN5Q6U736 354 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CREB3L2Q70SY1 520 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 SLC36A1Q7Z2H8 476 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 OR5AS1Q8N127 324 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 BOLLQ8N9W6 283 aaKnown RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 DYRK2Q92630 601 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 FBXO17Q96EF6 278 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 GPR137Q96N19 417 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 SORCS2Q96PQ0 1159 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ULBP2Q9BZM5 246 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 ACTR6Q9GZN1 396 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 SLC26A1Q9H2B4 701 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 CRLF2Q9HC73 371 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 VSIG4Q9Y279 399 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 PLEKHA6Q9Y2H5 1048 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 MRPS28Q9Y2Q9 187 aaKnown RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 KCNK7Q9Y2U2 307 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 RHBDD3Q9Y3P4 386 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 SMG1Q96Q15 3661 aaKnown RBP7.79□□□□□ -1.16
SNCA-201ENST00000336904 CCDC187A0A096LP49 1063 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 STMND1H3BQB6 276 aa7.79□□□□□ -1.16
SNCA-201ENST00000336904 M0R233 179 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms