RNA–Protein interactions for RNA: ENST00000335760.9

APOBEC3B-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3B, humanhuman

TSL 1 (best)

Gene APOBEC3B, Length 1,359 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3B-202ENST00000335760 H3BSA7 217 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 XRCC2O43543 280 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 RGS10O43665 173 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 CLPTM1O96005 669 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 MT-ND5P03915 603 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 SOD3P08294 240 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 DANCRP0C864 163 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 SELENOVP59797 346 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 ZNF92Q03936 586 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 EFNB3Q15768 340 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 TIGD6Q17RP2 521 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 GFOD2Q3B7J2 385 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR2G6Q5TZ20 316 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 AGAP6Q5VW22 663 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 MBNL2Q5VZF2 373 aaKnown RBP12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 EGFL6Q8IUX8 553 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR8B12Q8NGG6 310 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 SGK3Q96BR1 496 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 PELI1Q96FA3 418 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 YTHDF1Q9BYJ9 559 aaKnown RBP12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 CCDC90BQ9GZT6 254 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 LIME1Q9H400 295 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 G6PC2Q9NQR9 355 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 MYEF2Q9P2K5 600 aaKnown RBP12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR52A1Q9UKL2 312 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 LAMP3Q9UQV4 416 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 CELSR2Q9HCU4 2923 aa12.08□□□□□ -0.48
APOBEC3B-202ENST00000335760 A0A1W2PPW3 197 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 B9A039 149 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 CD8AP01732 235 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 EVX1P49640 407 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 GBX2P52951 348 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 PRSS12P56730 875 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 KLF3P57682 345 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 PSG7Q13046 419 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 GK2Q14410 553 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 BCL2L15Q5TBC7 163 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 FBXW12Q6X9E4 464 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 PGAP1Q75T13 922 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 MRPL21Q7Z2W9 205 aaKnown RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 CATSPERDQ86XM0 798 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR52N1Q8NH53 320 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 GATAD2BQ8WXI9 593 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 RNF166Q96A37 237 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 HAVCR1Q96D42 359 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 REEP6Q96HR9 211 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 TRAF4Q9BUZ4 470 aaPredicted RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 CDCA4Q9BXL8 241 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 MOB1AQ9H8S9 216 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 CBLN4Q9NTU7 201 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 TAAR3PQ9P1P4 343 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 NUFIP1Q9UHK0 495 aaKnown RBP12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 SLC22A13Q9Y226 551 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 ERGIC3Q9Y282 383 aa12.07□□□□□ -0.48
APOBEC3B-202ENST00000335760 E9PI62 339 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 MYL12BO14950 172 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 TIMM8AO60220 97 aaPredicted RBP12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 MT-ND2P03891 347 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 HTR1AP08908 422 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 RAC2P15153 192 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 GABARAPL2P60520 117 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 SNRPD2P62316 118 aaKnown RBP12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 SWI5Q1ZZU3 235 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 ALKBH6Q3KRA9 238 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 TMEM255AQ5JRV8 349 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 PAMR1Q6UXH9 720 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 PRSS48Q7RTY5 328 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 DTX2Q86UW9 622 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 KLBQ86Z14 1044 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 ELMOD2Q8IZ81 293 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 PRSS35Q8N3Z0 413 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 NANOGP1Q8N7R0 232 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR2G2Q8NGZ5 317 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 SPSB4Q96A44 273 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 LURAP1Q96LR2 239 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 CCL19Q99731 98 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 REPIN1Q9BWE0 567 aaKnown RBP12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 PURGQ9UJV8 347 aaKnown RBP12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 LRCH1Q9Y2L9 728 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 ROS1P08922 2347 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 FBN2P35556 2912 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 FLNBO75369 2602 aaKnown RBP12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 PLCE1Q9P212 2302 aa12.06□□□□□ -0.48
APOBEC3B-202ENST00000335760 IGLV3-9A0A075B6K5 115 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 TTRP02766 147 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 KITLGP21583 273 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ALDH3B1P43353 468 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 KIR3DL2P43630 455 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 NANOS3P60323 173 aaKnown RBP12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 IRF3Q14653 427 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 MOGQ16653 247 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 NKPD1Q17RQ9 610 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 ODF4Q2M2E3 257 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 WDR38Q5JTN6 314 aa12.05□□□□□ -0.48
APOBEC3B-202ENST00000335760 OR2T2Q6IF00 324 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms