RNA–Protein interactions for RNA: ENST00000335387.9

RC3H2-201, Transcript of ring finger and CCCH-type domains 2, humanhuman

TSL 1 (best) BASIC

Gene RC3H2, Length 3,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2-201ENST00000335387 OR2AT4A6NND4 320 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 TRAF3IP2O43734 574 aaPredicted RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 STK17BO94768 372 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 CNR1P21554 472 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 SLC6A9P48067 706 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 FBXW4P57775 412 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 HIST1H3AP68431 136 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 HIST2H3PS2Q5TEC6 136 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PRAMEF17Q5VTA0 474 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 LIN54Q6MZP7 749 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 C11orf88Q6PI97 169 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 LRFN4Q6PJG9 635 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 HIST2H3AQ71DI3 136 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 CCDC54Q8NEL0 328 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 SLC30A7Q8NEW0 376 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 STT3BQ8TCJ2 826 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 GHRLQ9UBU3 117 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 KCNK7Q9Y2U2 307 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 SZT2Q5T011 3432 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 KANTRA0A1W2PQU2 76 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 CBX5P45973 191 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 POU3F1Q03052 451 aaPredicted RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 INPP5JQ15735 1006 aaPredicted RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PAN3Q58A45 887 aaKnown RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 LINC00346Q8IVM7 164 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 ELP5Q8TE02 316 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 C1QTNF6Q9BXI9 259 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 FGF21Q9NSA1 209 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 MFNGO00587 321 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 SYT7O43581 403 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PRF1P14222 555 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 ARL4DP49703 201 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PPIAP62937 165 aaKnown RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 FAM122CQ6P4D5 195 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 ARSKQ6UWY0 536 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 CFAP77Q6ZQR2 320 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 SLC25A45Q8N413 288 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 OR4S1Q8NGB4 309 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PPP1R1CQ8WVI7 109 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 VRK1Q99986 396 aaPredicted RBP11.85□□□□□ -0.51
RC3H2-201ENST00000335387 PIGMQ9H3S5 423 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 GAREM1Q9H706 876 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 LMAN1LQ9HAT1 526 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 FBXO4Q9UKT5 387 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 GPR132Q9UNW8 380 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 FLVCR1Q9Y5Y0 555 aa11.85□□□□□ -0.51
RC3H2-201ENST00000335387 CRHP06850 196 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 CD79AP11912 226 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 CXADRP78310 365 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 IL15RAQ13261 267 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 PXDC1Q5TGL8 231 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 KLHL24Q6TFL4 600 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 SLC16A14Q7RTX9 510 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 TMEM17Q86X19 198 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 ACBD4Q8NC06 268 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 SLC25A43Q8WUT9 341 aaPredicted RBP11.84□□□□□ -0.51
RC3H2-201ENST00000335387 AIFM2Q9BRQ8 373 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 TPSD1Q9BZJ3 242 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 PTGES2Q9H7Z7 377 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 H3BSH0 61 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 CYCSP99999 105 aaKnown RBP11.84□□□□□ -0.51
RC3H2-201ENST00000335387 PPA1Q15181 289 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 OR10K2Q6IF99 312 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 C3orf33Q6P1S2 294 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.84□□□□□ -0.51
RC3H2-201ENST00000335387 ZBTB44Q8NCP5 570 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 OR5L2Q8NGL0 311 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 C10orf35Q96D05 121 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 ZC3H10Q96K80 434 aaKnown RBP11.84□□□□□ -0.51
RC3H2-201ENST00000335387 DUSP15Q9H1R2 295 aaPredicted RBP11.84□□□□□ -0.51
RC3H2-201ENST00000335387 RAB18Q9NP72 206 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 SDHAF3Q9NRP4 125 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 GTF2A1LQ9UNN4 478 aa11.84□□□□□ -0.51
RC3H2-201ENST00000335387 DNASE2O00115 360 aaPredicted RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 CDC14BO60729 498 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 SPDEFO95238 335 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 NAT2P11245 290 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 HRH1P35367 487 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 ATP1B3P54709 279 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 BIDP55957 195 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 MYBPHQ13203 477 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 SHBQ15464 509 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 TMEM71Q6P5X7 295 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 OR2M3Q8NG83 312 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 KCNG3Q8TAE7 436 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 PHF7Q9BWX1 381 aaPredicted RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 TM2D1Q9BX74 207 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 MED29Q9NX70 200 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 WIF1Q9Y5W5 379 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 GMFGO60234 142 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 IGHG1P01857 330 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 FCER2P06734 321 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 HIST1H1DP16402 221 aaKnown RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 ZNF93P35789 620 aaPredicted RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 ZNF121P58317 390 aaPredicted RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 LSM6P62312 80 aaKnown RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 SURF2Q15527 256 aaPredicted RBP11.83□□□□□ -0.52
RC3H2-201ENST00000335387 TMEM128Q5BJH2 165 aa11.83□□□□□ -0.52
RC3H2-201ENST00000335387 PLAC9Q5JTB6 97 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms