RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 CLDN10P78369 228 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GPM6BQ13491 265 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 AWAT1Q58HT5 328 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 FBXL22Q6P050 247 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SCGB1D4Q6XE38 83 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM70Q9BUB7 260 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 COL25A1Q9BXS0 654 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 BANF2Q9H503 90 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZMAT3Q9HA38 289 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 MED13LQ71F56 2210 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GPR32O75388 356 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 EIF3GO75821 320 aaKnown RBP eCLIP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 OR5G3P0C626 314 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 BTF3P20290 206 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ABHD17BQ5VST6 288 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SERINC5Q86VE9 423 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SEH1LQ96EE3 360 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 FBLL1A6NHQ2 334 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GPX5O75715 221 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 CTXN2P0C2S0 81 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 FAM189BP81408 668 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 DHODHQ02127 395 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 AQP6Q13520 282 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SLC35E4Q6ICL7 350 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 OR7E24Q6IFN5 339 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF516Q92618 1163 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF689Q96CS4 500 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 LRP6O75581 1613 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 IGHG1P01857 330 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 LIPNQ5VXI9 398 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 FDX2Q6P4F2 183 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 STARD4Q96DR4 205 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 DPH7Q9BTV6 452 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GGACTQ9BVM4 153 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ACPTQ9BZG2 426 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NOX4Q9NPH5 578 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 PHIPQ8WWQ0 1821 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 HS3ST1O14792 307 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SPINT2O43291 252 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NXPH2O95156 264 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 AKR1C3P42330 323 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NKX2-1P43699 371 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 PKDCCQ504Y2 493 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 LCN15Q6UWW0 184 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 OR11L1Q8NGX0 322 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NKX2-4Q9H2Z4 354 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 LHX3Q9UBR4 397 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GAGE10A6NGK3 116 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF732B4DXR9 585 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 VEGFAP15692 232 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 POU3F2P20265 443 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 PTGFRP43088 359 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SOWAHAQ2M3V2 549 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 OR5D18Q8NGL1 313 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SLCO4A1Q96BD0 722 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF256Q9Y2P7 627 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 PTPRDP23468 1912 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ALS2Q96Q42 1657 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 GFRA2O00451 464 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 EFSO43281 561 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 CD200P41217 278 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 HTR5AP47898 357 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM241Q24JQ0 296 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 C9orf135Q5VTT2 229 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 SAMD13Q5VXD3 122 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 DHRS13Q6UX07 377 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 RABEPKQ7Z6M1 372 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 CELF5Q8N6W0 485 aaKnown RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 NUP37Q8NFH4 326 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 C3orf30Q96M34 536 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 RTP3Q9BQQ7 232 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF2Q9BSG1 426 aaPredicted RBP9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 VN1R3Q9BXE9 311 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ASIC5Q9NY37 505 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF835Q9Y2P0 537 aa9.47□□□□□ -0.89
SPTBN1-201ENST00000333896 IGLV3-22A0A075B6J6 115 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 NRASP01111 189 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 HRASP01112 189 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 KRASP01116 189 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 RNASE1P07998 156 aaKnown RBP9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ACHEP22303 614 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ARSDP51689 593 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ATOH1Q92858 354 aaPredicted RBP9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF583Q96ND8 569 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 MAP1LC3CQ9BXW4 147 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 GKN1Q9NS71 199 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ZDHHC8Q9ULC8 765 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 A0A0D9SEW6 157 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 HMX2A2RU54 273 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 LRRC3CA6NJW4 275 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 WDR1O75083 606 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 SOD1P00441 154 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 LIMS3P0CW19 117 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 LIMS4P0CW20 117 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 PMCHL1Q16048 86 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 KLHDC8AQ8IYD2 350 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 MED20Q9H944 212 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 ZNF107Q9UII5 783 aaPredicted RBP9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 TMEM238LA0A1B0GVL6 79 aa9.46□□□□□ -0.89
SPTBN1-201ENST00000333896 A6NJY4 79 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms