RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NUDCD2Q8WVJ2 157 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 TNFAIP8L1Q8WVP5 186 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 PCNPQ8WW12 178 aaKnown RBP13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF775Q96BV0 537 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 UQCC2Q9BRT2 126 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A0J9YW62 118 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 NPIPA2E9PIF3 369 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 NPIPA3F8WFD2 350 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 BPNT1O95861 308 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 CFDP00746 253 aaPredicted RBP13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF735P0CB33 412 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 RAP2BP61225 183 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 CDNFQ49AH0 187 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 DCAF12L2Q5VW00 463 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 RHOUQ7L0Q8 258 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 OR5AS1Q8N127 324 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 LRRC18Q8N456 261 aa13.12□□□□□ -0.31
CLCNKA-201ENST00000331433 NOS1APO75052 506 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 STK17BO94768 372 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF35P13682 527 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 GNB3P16520 340 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 CXCL2P19875 107 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 EXOSC2Q13868 293 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 TRAPPC6BQ86SZ2 158 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF101Q8IZC7 436 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 OR2AK2Q8NG84 335 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 OR9K2Q8NGE7 335 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 ELMOD3Q96FG2 381 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC6A7Q99884 636 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 NICN1Q9BSH3 213 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 CLEC4MQ9H2X3 399 aaPredicted RBP13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 SLCO5A1Q9H2Y9 848 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 MYO7BQ6PIF6 2116 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 PLSCR5A0PG75 271 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM82A0PJX8 343 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 CD63P08962 238 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 MSR1P21757 451 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 CAPZA1P52907 286 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 Q0VFX4 171 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 OR52W1Q6IF63 320 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 RAB12Q6IQ22 244 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 C17orf107Q6ZR85 190 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 PPP1R32Q7Z5V6 425 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 CD163Q86VB7 1156 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 NTNG2Q96CW9 530 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 RADILQ96JH8 1075 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 RBM24Q9BX46 236 aaKnown RBP13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 SRXN1Q9BYN0 137 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 B3GNT2Q9NY97 397 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 OPN4Q9UHM6 478 aa13.11□□□□□ -0.31
CLCNKA-201ENST00000331433 LOC100509620A0A075B734 347 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 F5H5K5 113 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 M0R233 179 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 EIF1BO60739 113 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 CD74P04233 296 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 GUCA1AP43080 201 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 OR3A4PP47883 348 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 SIGLEC14Q08ET2 396 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 GLIPR1L1Q6UWM5 242 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 YRDCQ86U90 279 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM104Q8NE00 496 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 CYYR1Q96J86 154 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 SELENOIQ9C0D9 397 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 NCKAP5O14513 1909 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 OR5H15A6NDH6 313 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 CBR3O75828 277 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 ERCC1P07992 297 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 OR4E1P0C645 316 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 OR3A3P47888 321 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 SLC6A9P48067 706 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 GRB2P62993 217 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 ENDOGQ14249 297 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 RSPO4Q2I0M5 234 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 ATPAF1Q5TC12 328 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 THOC7Q6I9Y2 204 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM123Q8N131 208 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 OR13C8Q8NGS7 320 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM54Q969K7 222 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 NABP1Q96AH0 204 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 ZNF837Q96EG3 531 aaPredicted RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 NELFAQ9H3P2 528 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 UPB1Q9UBR1 384 aa13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 MRPS28Q9Y2Q9 187 aaKnown RBP13.1□□□□□ -0.31
CLCNKA-201ENST00000331433 KIAA1549Q9HCM3 1950 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 A0A1W2PP11 408 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 TMEM14DPA8MWL7 114 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 SMAD9O15198 467 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 HCKP08631 526 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 LIPCP11150 499 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 TCN2P20062 427 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 LSM6P62312 80 aaKnown RBP13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 RAC1P63000 192 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 CSNK2A1P68400 391 aaPredicted RBP13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 DHODHQ02127 395 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 POU4F3Q15319 338 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 DCAF12Q5T6F0 453 aa13.09□□□□□ -0.31
CLCNKA-201ENST00000331433 C11orf88Q6PI97 169 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms