RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 SPACA5Q96QH8 159 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 ZNF416Q9BWM5 594 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 GPR84Q9NQS5 396 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 FARSAQ9Y285 508 aaKnown RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 KIAA1549Q9HCM3 1950 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 OR14I1A6ND48 311 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 OR6C65A6NJZ3 312 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 HMSDA8MTL9 139 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 LAMTOR5O43504 91 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 ZIC3O60481 467 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 CER1O95813 267 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 GRB2P62993 217 aaKnown RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 MEF2DQ14814 521 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 SCGB2B2Q4G0G5 96 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 PHYHD1Q5SRE7 291 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 RAET1LQ5VY80 246 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 TMED4Q7Z7H5 227 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 GVQW1Q8N7I0 195 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 NUDCD2Q8WVJ2 157 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 PCNPQ8WW12 178 aaKnown RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 FAM71F1Q96KD3 344 aaPredicted RBP12.86□□□□□ -0.35
TPM3-206ENST00000330188 SLC2A8Q9NY64 477 aa12.86□□□□□ -0.35
TPM3-206ENST00000330188 NSG1A0A0A6YYJ2 146 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 IGHV3-15A0A0B4J1V0 119 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 DISC1C4P0D8 188 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 MASP2O00187 686 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 SCGNO76038 276 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 CSNK1A1P48729 337 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 MLF1P58340 268 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 LSM6P62312 80 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 SGCAQ16586 387 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 C10orf128Q5T292 105 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 C1QTNF12Q5T7M4 302 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 FAM57BQ71RH2 274 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 DOK3Q7L591 496 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 RTN4RL2Q86UN3 420 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 C12orf45Q8N5I9 185 aaPredicted RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 ANGPTL6Q8NI99 470 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 TMEM54Q969K7 222 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 ZNF385AQ96PM9 386 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 NUDT16L1Q9BRJ7 211 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 ZNF160Q9HCG1 818 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 NCOA6Q14686 2063 aaPredicted RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 E9PLN8 166 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 CSN2P05814 226 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 NR2C1P13056 603 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 GNB3P16520 340 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 MPZP25189 248 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 GSK3AP49840 483 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 ZNF133P52736 654 aaPredicted RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 NKPD1Q17RQ9 610 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 SLC22A6Q4U2R8 563 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 TRIM61Q5EBN2 209 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 RNASE10Q5GAN6 216 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 C11orf88Q6PI97 169 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 GLIPR1L1Q6UWM5 242 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 PGAP1Q75T13 922 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 CD163Q86VB7 1156 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 RPS19BP1Q86WX3 136 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 ZNF101Q8IZC7 436 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 TMEM156Q8N614 296 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 OR10R2Q8NGX6 335 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 ASB13Q8WXK3 278 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 C1orf147Q96MC9 270 aaPredicted RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 JSRP1Q96MG2 331 aaPredicted RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 UCN2Q96RP3 112 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 NICN1Q9BSH3 213 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 LPAR5Q9H1C0 372 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 DKKL1Q9UK85 242 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 VSIG4Q9Y279 399 aa12.85□□□□□ -0.35
TPM3-206ENST00000330188 MRPS28Q9Y2Q9 187 aaKnown RBP12.85□□□□□ -0.35
TPM3-206ENST00000330188 FXYD6-FXYD2A0A087WZ82 144 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 A0A0A6YYD4 124 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 ARPC5O15511 151 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 EIF1BO60739 113 aaKnown RBP12.84□□□□□ -0.35
TPM3-206ENST00000330188 MSR1P21757 451 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 CTSSP25774 331 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 FOLR3P41439 243 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 ENDOGQ14249 297 aaKnown RBP12.84□□□□□ -0.35
TPM3-206ENST00000330188 GFOD2Q3B7J2 385 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 LY6G6FQ5SQ64 297 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 C3P1Q6ZMU1 363 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 C17orf107Q6ZR85 190 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 FOXL2NBQ6ZUU3 175 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 OR2W3Q7Z3T1 314 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 NABP1Q96AH0 204 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 SELENOIQ9C0D9 397 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 FXYD6Q9H0Q3 95 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 NELFAQ9H3P2 528 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 HPF1Q9NWY4 346 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 SLC39A1Q9NY26 324 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 CFAP54Q96N23 3096 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 WDR87Q6ZQQ6 2873 aa12.84□□□□□ -0.35
TPM3-206ENST00000330188 C5orf63A6NC05 138 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 SSX5O60225 188 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 VAMP5O95183 116 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 WDPCPO95876 746 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 CD63P08962 238 aa12.83□□□□□ -0.35
TPM3-206ENST00000330188 S100A11P31949 105 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms