RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 TMEM104Q8NE00 496 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 OR6K3Q8NGY3 331 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 CRB3Q9BUF7 120 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 DUSP23Q9BVJ7 150 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 TAS2R3Q9NYW6 316 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 PRR13Q9NZ81 148 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 COL4A2P08572 1712 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 OR2AT4A6NND4 320 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 F5H0A9 414 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 TOMM20Q15388 145 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 SGCAQ16586 387 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 WDR74Q6RFH5 385 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 FAM57BQ71RH2 274 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF283Q8N7M2 679 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 AQP3Q92482 292 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 GPR84Q9NQS5 396 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 FSCN3Q9NQT6 498 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 CYB5R1Q9UHQ9 305 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 B3GALT5Q9Y2C3 310 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 SIT1Q9Y3P8 196 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 SNAPC5O75971 98 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 DCDP81605 110 aaKnown RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 LYSMD4Q5XG99 296 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 RHBDD2Q6NTF9 364 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 PXT1Q8NFP0 134 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 THAP6Q8TBB0 222 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 CHRDQ9H2X0 955 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 AKIRIN1Q9H9L7 192 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 ELL3Q9HB65 397 aaPredicted RBP12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 ALKBH4Q9NXW9 302 aa12.47□□□□□ -0.41
ATP2C1-201ENST00000328560 OR14I1A6ND48 311 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF814B7Z6K7 855 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 D6RAR5 112 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 CD74P04233 296 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 CFIP05156 583 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ANOS1P23352 680 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 OR3A4PP47883 348 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF121P58317 390 aaPredicted RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 FGL1Q08830 312 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZP4Q12836 540 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ARFRP1Q13795 201 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 C11orf87Q6NUJ2 197 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 DEGS2Q6QHC5 323 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF574Q6ZN55 896 aaPredicted RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 LYG2Q86SG7 212 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 BVESQ8NE79 360 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 OR4K15Q8NH41 348 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 PHB2Q99623 299 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 MRPS28Q9Y2Q9 187 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 C9orf170A2RU37 121 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF726A6NNF4 738 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 SOCS1O15524 211 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 NPY4RP50391 375 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 TAGLNQ01995 201 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 RSPO4Q2I0M5 234 aaPredicted RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 GUSBP11Q6P575 273 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 RABEPKQ7Z6M1 372 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 DNASE2BQ8WZ79 361 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 ZNF768Q9H5H4 540 aaKnown RBP12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 KLHL13Q9P2N7 655 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 B3GAT1Q9P2W7 334 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 LHFPL6Q9Y693 200 aa12.46□□□□□ -0.41
ATP2C1-201ENST00000328560 A0A0A6YYH2 397 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 A6NJ64 397 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 KRBOX1C9JBD0 128 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 IGHG1P01857 330 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 MGMTP16455 207 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 ZNF43P17038 809 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 STARD6P59095 220 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 BAMBIQ13145 260 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 SLC9A3R2Q15599 337 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 INO80EQ8NBZ0 244 aaPredicted RBP12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 OR4K17Q8NGC6 315 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 MAFIPQ8WZ33 124 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 ZNF319Q9P2F9 582 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 MBD2Q9UBB5 411 aa12.46□□□□□ -0.42
ATP2C1-201ENST00000328560 A0A0D9SG52 128 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 G3V3Y1 287 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 GDF9O60383 454 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 HTR3BO95264 441 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 QDPRP09417 244 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 SLC6A9P48067 706 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 ST6GALNAC5Q9BVH7 336 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 DEFB126Q9BYW3 111 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 C19orf25Q9UFG5 118 aaPredicted RBP12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 LOC390937A0A1W2PQ73 354 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 TMEM200CA6NKL6 621 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 RAB6AP20340 208 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 ZBTB25P24278 435 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 AKR1C2P52895 323 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 GABREP78334 506 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 AKR1C1Q04828 323 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 SLC25A42Q86VD7 318 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 PPP1R3BQ86XI6 285 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 OR8B12Q8NGG6 310 aa12.45□□□□□ -0.42
ATP2C1-201ENST00000328560 ZNF775Q96BV0 537 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms