RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FAM3AP98173 230 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 WBP2NLQ6ICG8 309 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 REC114Q7Z4M0 266 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 CA13Q8N1Q1 262 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 NKAIN3Q8N8D7 197 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 CPNE4Q96A23 557 aaPredicted RBP11.4□□□□□ -0.59
CCDC60-201ENST00000327554 ZNF524Q96C55 264 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 MEGF10Q96KG7 1140 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 GNRHR2Q96P88 292 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 CCNL2Q96S94 520 aaPredicted RBP11.4□□□□□ -0.59
CCDC60-201ENST00000327554 RTBDNQ9BSG5 229 aaPredicted RBP11.4□□□□□ -0.59
CCDC60-201ENST00000327554 PHPT1Q9NRX4 125 aaPredicted RBP11.4□□□□□ -0.59
CCDC60-201ENST00000327554 GFOD1Q9NXC2 390 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 PPP4R1LQ9P1A2 415 aa11.4□□□□□ -0.59
CCDC60-201ENST00000327554 USP34Q70CQ2 3546 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 LOC107986453A0A1B0GWG9 222 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 CXorf65A6NEN9 183 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 NME2P1O60361 137 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 SLC35E2P0CK97 266 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 RAB1AP62820 205 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 LHX8Q68G74 356 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 UNQ6494/PRO21346Q6UXR6 183 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 MED25Q71SY5 747 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 PEG10Q86TG7 708 aaKnown RBP11.39□□□□□ -0.59
CCDC60-201ENST00000327554 STX12Q86Y82 276 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 GATSQ8NAP1 163 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 GSKIPQ9P0R6 139 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 DOK5Q9P104 306 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 ANAPC10Q9UM13 185 aa11.39□□□□□ -0.59
CCDC60-201ENST00000327554 TMEM184BQ9Y519 407 aaPredicted RBP11.39□□□□□ -0.59
CCDC60-201ENST00000327554 JTBO76095 146 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 VSIG8P0DPA2 414 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 RPS2P15880 293 aaKnown RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 RPL12P30050 165 aaKnown RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 NDUFA6P56556 154 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 TAS2R60P59551 318 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 CCINQ13939 588 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 CLINT1Q14677 625 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 ACTBL2Q562R1 376 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 HIST2H3AQ71DI3 136 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 MARCH3Q86UD3 253 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 FOXRED2Q8IWF2 684 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 CPAMD8Q8IZJ3 1885 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 KDM8Q8N371 416 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 ZNF615Q8N8J6 731 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 RSC1A1Q92681 617 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 PIGQQ9BRB3 760 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 ABHD6Q9BV23 337 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 CREBZFQ9NS37 354 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 ARID1BQ8NFD5 2236 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 TNFSF14O43557 240 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 OR2C1O95371 312 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 TBC1D3HP0C7X1 549 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 LMO1P25800 156 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 GDI1P31150 447 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 FCGR2CP31995 323 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 RPS10P46783 165 aaKnown RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 TOMM34Q15785 309 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 VAX1Q5SQQ9 334 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 AGBL4Q5VU57 503 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 KCTD18Q6PI47 426 aaPredicted RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 MR1Q95460 341 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 TAAR8Q969N4 342 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 G6PC3Q9BUM1 346 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 CNTNAP3Q9BZ76 1288 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
CCDC60-201ENST00000327554 G6PC2Q9NQR9 355 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 SLC17A4Q9Y2C5 497 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 EMC9Q9Y3B6 208 aa11.38□□□□□ -0.59
CCDC60-201ENST00000327554 IGLV1-36A0A0B4J1U3 117 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 H0YGG7 62 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CT45A8P0DMV1 189 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CT45A9P0DMV2 189 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 FPR2P25090 351 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 TMEM33P57088 247 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 ARF3P61204 181 aaPredicted RBP11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CT45A2Q5DJT8 189 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 FIGLAQ6QHK4 219 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 OPN5Q6U736 354 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 BCORP1Q8N888 145 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 C19orf47Q8N9M1 422 aaKnown RBP11.37□□□□□ -0.59
CCDC60-201ENST00000327554 OR10D4PQ8NGN7 298 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CD300LFQ8TDQ1 290 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 MUCL1Q96DR8 90 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CYYR1Q96J86 154 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 KLHDC3Q9BQ90 382 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 SMIM3Q9BZL3 60 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 ARV1Q9H2C2 271 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 R4GMQ9 66 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 LOC101059948A0A1B0GTJ6 334 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 H7C1Q1 480 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 K7EPK0 472 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 ZNF354AO60765 605 aaPredicted RBP11.37□□□□□ -0.59
CCDC60-201ENST00000327554 BPNT1O95861 308 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 ISG15P05161 165 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 DANCRP0C864 163 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CLDN6P56747 220 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 RAP1AP62834 184 aa11.37□□□□□ -0.59
CCDC60-201ENST00000327554 SRSF5Q13243 272 aaKnown RBP11.37□□□□□ -0.59
CCDC60-201ENST00000327554 CD226Q15762 336 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms