RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 ABHD12BQ7Z5M8 362 aaPredicted RBP16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 LIX1LQ8IVB5 337 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 ASB5Q8WWX0 329 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 RND1Q92730 232 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 PPP1R14AQ96A00 147 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF416Q9BWM5 594 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 PNRC2Q9NPJ4 139 aaKnown RBP16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 EXTL2Q9UBQ6 330 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 DHDHQ9UQ10 334 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 PCNX1Q96RV3 2341 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 MYO7BQ6PIF6 2116 aa16.39■□□□□ 0.21
EXOSC3-201ENST00000327304 PAHP00439 452 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 IGHV1-2P23083 117 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 AZGP1P25311 298 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 HSD11B1P28845 292 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 PSMA6P60900 246 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 IL18Q14116 193 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ENDOGQ14249 297 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 GABRG1Q8N1C3 465 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 LRRC18Q8N456 261 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF433Q8N7K0 673 aaPredicted RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 KCNJ15Q99712 375 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 BRD7Q9NPI1 651 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 FOXJ3Q9UPW0 622 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 CHD6Q8TD26 2715 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 CNOT4O95628 575 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 EIF4EP06730 217 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ADRA2CP18825 462 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 CFPP27918 469 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 GRB2P62993 217 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 HIST1H3AP68431 136 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 SCN1BQ07699 218 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 HIST2H3PS2Q5TEC6 136 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 HIST2H3AQ71DI3 136 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 FJX1Q86VR8 437 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ELMOD2Q8IZ81 293 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 SLC22A24Q8N4F4 322 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 GJC3Q8NFK1 279 aa16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 DDX28Q9NUL7 540 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF629Q9UEG4 869 aaPredicted RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 NUFIP1Q9UHK0 495 aaKnown RBP16.38■□□□□ 0.21
EXOSC3-201ENST00000327304 ESPL1Q14674 2120 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 TRAV8-7A0A075B6U6 113 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 A0A096LPE4 126 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 A0A1W2PPZ6 126 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 CSF3P09919 207 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 CALCBP10092 127 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 SNRPBP14678 240 aaKnown RBP16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 FSTP19883 344 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 SCAND1P57086 179 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 TAF13Q15543 124 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 FAM27BQ5VT28 67 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF474Q6S9Z5 364 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF627Q7L945 461 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 LUZP2Q86TE4 346 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 RELL2Q8NC24 303 aaPredicted RBP16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 ZNF671Q8TAW3 534 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 PBOV1Q9GZY1 135 aa16.37■□□□□ 0.21
EXOSC3-201ENST00000327304 NCOA6Q14686 2063 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 LOC107986453A0A1B0GWG9 222 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 ANXA2P2A6NMY6 339 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 EEF1E1-BLOC1S5C9J1V9 151 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 RER1O15258 196 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 EEF1E1O43324 174 aaKnown RBP16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 LYZL6O75951 148 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 HLA-DQB1P01920 261 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 ANXA2P07355 339 aaKnown RBP16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 COX5AP20674 150 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 P2RY14Q15391 338 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 TSC22D1Q15714 1073 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 SKA3Q8IX90 412 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 OR4M1Q8NGD0 313 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 OR1K1Q8NGR3 316 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 OR5H6Q8NGV6 325 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 PRR7Q8TB68 274 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 FBXO17Q96EF6 278 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 PIGMQ9H3S5 423 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 RABL2AQ9UBK7 228 aaPredicted RBP16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 CKLFQ9UBR5 152 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 TBC1D24Q9ULP9 559 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 RABL2BQ9UNT1 228 aa16.36■□□□□ 0.21
EXOSC3-201ENST00000327304 TTRP02766 147 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 PITPNBP48739 271 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 HES5Q5TA89 166 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 BEND4Q6ZU67 534 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 CXorf67Q86X51 503 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 Q8N402 240 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 FGFBP3Q8TAT2 258 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 BCL2L2Q92843 193 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 CACNA1CQ13936 2221 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 A0A1W2PQ09 198 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 MSTNO14793 375 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 MAS1P04201 325 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 CST2P09228 141 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 ACSM4P0C7M7 580 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 PATE4P0C8F1 98 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 IGFBP3P17936 291 aaPredicted RBP16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 NR4A2P43354 598 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 ADORA2A-AS1P86434 159 aa16.35■□□□□ 0.21
EXOSC3-201ENST00000327304 NRN1LQ496H8 165 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms