RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 Q8WTZ3 238 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 GINS3Q9BRX5 216 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 CNTNAP3Q9BZ76 1288 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 GPR61Q9BZJ8 451 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 SRMSQ9H3Y6 488 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 SMOC1Q9H4F8 434 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 ELOVL3Q9HB03 270 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 SRA1Q9HD15 236 aaKnown RBP6.96□□□□□ -1.3
CD46-201ENST00000322875 FBXL17Q9UF56 701 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 TUBD1Q9UJT1 453 aa6.96□□□□□ -1.3
CD46-201ENST00000322875 A0A1W2PRU2 124 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 OR5H15A6NDH6 313 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 OR5H1A6NKK0 313 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 TSTD3H0UI37 97 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CTSVO60911 334 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 DEDDO75618 318 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ISG15P05161 165 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CISD3P0C7P0 127 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ELNP15502 786 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ZNF84P51523 738 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 NUBP1P53384 320 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 GPR18Q14330 331 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 EXOSC7Q15024 291 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 MEP1BQ16820 701 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RTN4RL2Q86UN3 420 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 TMEM52Q8NDY8 209 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 OR10AD1Q8NGE0 317 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RAB24Q969Q5 203 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RCC1LQ96I51 464 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 MOGAT1Q96PD6 335 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CCNL2Q96S94 520 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 CDCA3Q99618 268 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 CMKLR1Q99788 373 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 TMEM106CQ9BVX2 250 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 FAM212BQ9NTI7 297 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 PRODH2Q9UF12 536 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 HS3ST3B1Q9Y662 390 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 ZNF726A6NNF4 738 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 SYT7O43581 403 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 FGF17O60258 216 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ZNF354AO60765 605 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 RAMP1O60894 148 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 PTBP3O95758 552 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 S1PR1P21453 382 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 FPR2P25090 351 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RPL12P30050 165 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 RPS10P46783 165 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 PPM1FP49593 454 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 TMEM33P57088 247 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 UBE2V2Q15819 145 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ITPRIPL2Q3MIP1 535 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 HIKESHIQ53FT3 197 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 AADACL3Q5VUY0 350 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 NUP54Q7Z3B4 507 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CPAMD8Q8IZJ3 1885 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 M1APQ8TC57 530 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 SMARCD2Q92925 531 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 S100PBPQ96BU1 408 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 PTGES2Q9H7Z7 377 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 PRR13Q9NZ81 148 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 A0A0C4DFX4 3053 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ZNF587BE7ETH6 402 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ADH1CP00326 375 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 PRNPP04156 253 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 PRKAR2AP13861 404 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 CSF2RAP15509 400 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CASP6P55212 293 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ERVFRD-1P60508 538 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CTXN1P60606 82 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RNF4P78317 190 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 EGR4Q05215 589 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CCINQ13939 588 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ALG10Q5BKT4 473 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 LY6G5CQ5SRR4 150 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ABLIM2Q6H8Q1 611 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CLEC9AQ6UXN8 241 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 ZNF101Q8IZC7 436 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 NKAIN3Q8N8D7 197 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 RNASEH2CQ8TDP1 164 aaKnown RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 ABHD5Q8WTS1 349 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 SLC25A44Q96H78 314 aaPredicted RBP6.95□□□□□ -1.3
CD46-201ENST00000322875 NDUFAF3Q9BU61 184 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 LMAN2LQ9H0V9 348 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 MMP25Q9NPA2 562 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 CKLFQ9UBR5 152 aa6.95□□□□□ -1.3
CD46-201ENST00000322875 SCN3AQ9NY46 2000 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 H7C1C5 153 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 CYR61O00622 381 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 NME2P1O60361 137 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 IL18BPO95998 194 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 TIMP1P01033 207 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 IL2RGP31785 369 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 IGFALSP35858 605 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 CCR2P41597 374 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 LCN6P62502 163 aa6.94□□□□□ -1.3
CD46-201ENST00000322875 BIKQ13323 160 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms