RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 STEAP2Q8NFT2 490 aa19.77■□□□□ 0.76
PNKP-201ENST00000322344 OR4S1Q8NGB4 309 aa19.77■□□□□ 0.76
PNKP-201ENST00000322344 MR1Q95460 341 aa19.77■□□□□ 0.76
PNKP-201ENST00000322344 PTRH2Q9Y3E5 179 aaKnown RBP19.77■□□□□ 0.76
PNKP-201ENST00000322344 I3L521 148 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 RER1O15258 196 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 EIF1BO60739 113 aaKnown RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 VAMP5O95183 116 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 CFIP05156 583 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 UMODP07911 640 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 COX6A1P12074 109 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 GUCA1AP43080 201 aaPredicted RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 CXADRP78310 365 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 H3F3AP84243 136 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 SRSF4Q08170 494 aaKnown RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 FGL1Q08830 312 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 DHRS2Q13268 280 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 AANATQ16613 207 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 SLC25A42Q86VD7 318 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 ZNF101Q8IZC7 436 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 OR5AS1Q8N127 324 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 ZNF283Q8N7M2 679 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 CMBLQ96DG6 245 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 ARL6Q9H0F7 186 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 MRPS28Q9Y2Q9 187 aaKnown RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 TNRC6BQ9UPQ9 1833 aaKnown RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 RALGAPA1Q6GYQ0 2036 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 TEX51A0A1B0GUA7 166 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 CD34P28906 385 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 AGTR1P30556 359 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 CALCRP30988 508 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 DSCR4P56555 118 aaPredicted RBP19.76■□□□□ 0.75
PNKP-201ENST00000322344 C10orf128Q5T292 105 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 OR5M8Q8NGP6 311 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 SCARB1Q8WTV0 552 aa19.76■□□□□ 0.75
PNKP-201ENST00000322344 NTN3O00634 580 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 CD8AP01732 235 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 GSTP1P09211 210 aaKnown RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 UBBP0CG47 229 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 ABOP16442 354 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 CSNK1A1P48729 337 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 SSR4P51571 173 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 SORDQ00796 357 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 NKPD1Q17RQ9 610 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 LY6G6FQ5SQ64 297 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 LIN54Q6MZP7 749 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 GLIPR1L1Q6UWM5 242 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 KCNG3Q8TAE7 436 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 C17orf50Q8WW18 174 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 NTNG2Q96CW9 530 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 NAA11Q9BSU3 229 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 MED9Q9NWA0 146 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 VSIG4Q9Y279 399 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 CELA2AP08217 269 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 MSR1P21757 451 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 ZNF133P52736 654 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 PEAR1Q5VY43 1037 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 FAHD2BQ6P2I3 314 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 GSG1LQ6UXU4 331 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 CD163Q86VB7 1156 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 PAQR8Q8TEZ7 354 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 NUDCD2Q8WVJ2 157 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 PCNPQ8WW12 178 aaKnown RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 TMEM54Q969K7 222 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 FAHD2AQ96GK7 314 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 FAM71F1Q96KD3 344 aaPredicted RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 SELENOIQ9C0D9 397 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 LPAR5Q9H1C0 372 aa19.75■□□□□ 0.75
PNKP-201ENST00000322344 RYDENQ9NUL5 291 aaKnown RBP19.75■□□□□ 0.75
PNKP-201ENST00000322344 ASCC3Q8N3C0 2202 aaKnown RBP19.74■□□□□ 0.75
PNKP-201ENST00000322344 CSN2P05814 226 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 SLC2A1P11166 492 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 LIFP15018 202 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 CASRP41180 1078 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 MC2RQ01718 297 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 FOXL2NBQ6ZUU3 175 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 FAM57BQ71RH2 274 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 ZNF319Q9P2F9 582 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 HS3ST3B1Q9Y662 390 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 SDK1Q7Z5N4 2213 aa19.74■□□□□ 0.75
PNKP-201ENST00000322344 KLF7O75840 302 aaPredicted RBP19.73■□□□□ 0.75
PNKP-201ENST00000322344 HLA-AP01891 365 aaKnown RBP19.73■□□□□ 0.75
PNKP-201ENST00000322344 GNB3P16520 340 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 KLK2P20151 261 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 ZBTB25P24278 435 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 ZFP36L1Q07352 338 aaKnown RBP19.73■□□□□ 0.75
PNKP-201ENST00000322344 GK2Q14410 553 aaPredicted RBP19.73■□□□□ 0.75
PNKP-201ENST00000322344 SGCAQ16586 387 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 LYG2Q86SG7 212 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 BEST3Q8N1M1 668 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 GVQW1Q8N7I0 195 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 ZNF416Q9BWM5 594 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 MFFQ9GZY8 342 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 SH2D2AQ9NP31 389 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 NOP16Q9Y3C1 178 aaKnown RBP19.73■□□□□ 0.75
PNKP-201ENST00000322344 STK17BO94768 372 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 IL2RAP01589 272 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 HCKP08631 526 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 CCL3P10147 92 aa19.73■□□□□ 0.75
PNKP-201ENST00000322344 TDGF1P13385 188 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms