RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 OR5AP2Q8NGF4 316 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 GPR148Q8TDV2 347 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF251Q9BRH9 671 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 OCIAD1Q9NX40 245 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 CDV3Q9UKY7 258 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 EMC9Q9Y3B6 208 aa13.86□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF705EA8MWA4 302 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 CELA2AP08217 269 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC25A4P12235 298 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 SGCBQ16585 318 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 ISXQ2M1V0 245 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 NKD1Q969G9 470 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 TAS2R8Q9NYW2 309 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 CGGBP1Q9UFW8 167 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 RPH3AQ9Y2J0 694 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 NOP16Q9Y3C1 178 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 BDP1A6H8Y1 2624 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 A0A1W2PNR3 127 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 PLPP3O14495 311 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 SNAPINO95295 136 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 CSN2P05814 226 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 APEHP13798 732 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 ABOP16442 354 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 PRSS3P35030 304 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 TLE3Q04726 772 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 OR10K2Q6IF99 312 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 C3orf33Q6P1S2 294 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 TMEM205Q6UW68 189 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 CNTNAP3BQ96NU0 1288 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 ABHD6Q9BV23 337 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 UQCC1Q9NVA1 299 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 WNT16Q9UBV4 365 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 ASPMQ8IZT6 3477 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 NPIPA5E9PKD4 350 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 LMX1BO60663 402 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 CD79AP11912 226 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 AKR1C3P42330 323 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 POU3F4P49335 361 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 ECH1Q13011 328 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 C5orf46Q6UWT4 87 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 RHOUQ7L0Q8 258 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 MAFAQ8NHW3 353 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 C15orf40Q8WUR7 153 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 LIPHQ8WWY8 451 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 SPSB2Q99619 263 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 SELENOIQ9C0D9 397 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 METTL7AQ9H8H3 244 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 COMMD9Q9P000 198 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 RARRES3Q9UL19 164 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 NPIPA1Q9UND3 350 aa13.85□□□□□ -0.19
SHROOM1-201ENST00000319854 LOC100509620A0A075B734 347 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 LOC101059948A0A1B0GTJ6 334 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 C5orf52A6NGY3 159 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 ITGA5P08648 1049 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 CD34P28906 385 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 AVPR2P30518 371 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 GFOD2Q3B7J2 385 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 AKIRIN2Q53H80 203 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC18B1Q6NT16 456 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 RHBDD2Q6NTF9 364 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 MISPQ8IVT2 679 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 OR1J4Q8NGS1 313 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 OR10R2Q8NGX6 335 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 TMED6Q8WW62 240 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 C4orf45Q96LM5 186 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 CCDC74BQ96LY2 380 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 TXNIPQ9H3M7 391 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 RAB3DO95716 219 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 TXNDC12O95881 172 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 AMY2AP04746 511 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 ZNF44P15621 663 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 SPOCK1Q08629 439 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 MST1LQ2TV78 715 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 HLA-BQ31612 363 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 C2orf76Q3KRA6 126 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 WDR74Q6RFH5 385 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 DCXRQ7Z4W1 244 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 NAA40Q86UY6 237 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 PAQR4Q8N4S7 273 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 SEC61A2Q9H9S3 476 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 MBD2Q9UBB5 411 aa13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 FARSAQ9Y285 508 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-201ENST00000319854 IGHV5-10-1A0A0J9YXX1 117 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 SMIM6P0DI80 62 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 RD3LP0DJH9 198 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 PTAFRP25105 342 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 SLC17A1Q14916 467 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 SCGB2B2Q4G0G5 96 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 EMC4Q5J8M3 183 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 OR51A2Q8NGJ7 313 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 TCEAL3Q969E4 200 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 DCBLD2Q96PD2 775 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 MRI1Q9BV20 369 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 CHRNA10Q9GZZ6 450 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 SMOC1Q9H4F8 434 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 GHRLQ9UBU3 117 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 TMEM14AQ9Y6G1 99 aa13.83□□□□□ -0.19
SHROOM1-201ENST00000319854 HLA-AP01891 365 aaKnown RBP13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 PGAM2P15259 253 aa13.83□□□□□ -0.2
SHROOM1-201ENST00000319854 ZNF823P16415 610 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms