RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 COLCA1Q6ZS62 124 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 OR5AS1Q8N127 324 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 OR10AD1Q8NGE0 317 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 OR52L1Q8NGH7 329 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 TAF15Q92804 592 aaKnown RBP eCLIP11.87□□□□□ -0.51
RPP40-201ENST00000319533 APOBEC3DQ96AK3 386 aaPredicted RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 PLEKHA8Q96JA3 519 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 PTTG3PQ9NZH4 202 aa11.87□□□□□ -0.51
RPP40-201ENST00000319533 COA3Q9Y2R0 106 aaPredicted RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 SAMHD1Q9Y3Z3 626 aaKnown RBP11.87□□□□□ -0.51
RPP40-201ENST00000319533 IGHV3OR16-10A0A075B7F0 116 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 TRAV40A0A0B4J280 105 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 AQP12BA6NM10 295 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 H0YL77 283 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 ARPC3O15145 178 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 RER1O15258 196 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 GPANK1O95872 356 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 RENP00797 406 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 CRABP1P29762 137 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 GATA4P43694 442 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 ACTR3P61158 418 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 FLOT2Q14254 428 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 RSPO1Q2MKA7 263 aaPredicted RBP11.86□□□□□ -0.51
RPP40-201ENST00000319533 KRTAP27-1Q3LI81 207 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 ZNF362Q5T0B9 420 aaPredicted RBP11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR2T5Q6IEZ7 315 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 ZNF620Q6ZNG0 422 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 AQP12AQ8IXF9 295 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 CELF2-AS1Q8N7Q2 184 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR9Q2Q8NGE9 314 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR8B3Q8NGG8 313 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR4C15Q8NGM1 316 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR10S1Q8NGN2 331 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR2T29Q8NH02 315 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 ZNF582Q96NG8 517 aaPredicted RBP11.86□□□□□ -0.51
RPP40-201ENST00000319533 OR8B2Q96RD0 313 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 COQ7Q99807 217 aa11.86□□□□□ -0.51
RPP40-201ENST00000319533 MDFIC2A0A1B0GVS7 189 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 DHRS12A0PJE2 317 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 LRRC30A6NM36 301 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 SRRM5B3KS81 715 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 H0YHG0 523 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 HOXA3O43365 443 aaPredicted RBP11.85□□□□□ -0.51
RPP40-201ENST00000319533 IDH3BO43837 385 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 ZNF205O95201 554 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 PITPNBP48739 271 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 CENPAP49450 140 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 GK3PQ14409 553 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 DEFB112Q30KQ8 113 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 OTPQ5XKR4 325 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 WDR25Q64LD2 544 aaPredicted RBP11.85□□□□□ -0.51
RPP40-201ENST00000319533 ZNF841Q6ZN19 808 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 DCDC5Q6ZRR9 648 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 PTCHD4Q6ZW05 846 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 SPATC1Q76KD6 591 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 NLRC3Q7RTR2 1065 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 MOGAT3Q86VF5 341 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 C1orf87Q8N0U7 546 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 AQP11Q8NBQ7 271 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 GJC3Q8NFK1 279 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 Q8TCH9 128 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 ERGIC1Q969X5 290 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 NUDT16L1Q9BRJ7 211 aaKnown RBP11.85□□□□□ -0.51
RPP40-201ENST00000319533 CHID1Q9BWS9 393 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 NUAK2Q9H093 628 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 HDHD2Q9H0R4 259 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 NOX4Q9NPH5 578 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 POLR1DQ9Y2S0 133 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 LHFPL6Q9Y693 200 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 CDH10Q9Y6N8 788 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 U3KQV3 271 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 NOTCH1P46531 2555 aa11.85□□□□□ -0.51
RPP40-201ENST00000319533 TCRBV3S1A0A5B6 114 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 F5H5P2 479 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 GNGT2O14610 69 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 PHYHO14832 338 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 NDUFA7O95182 113 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 SELEP16581 610 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 PSMB10P40306 273 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 CDKN2AP42771 156 aaKnown RBP11.84□□□□□ -0.51
RPP40-201ENST00000319533 RAD23AP54725 363 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 MAB21L1Q13394 359 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 MICAQ29983 383 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 CLEC12AQ5QGZ9 265 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 FAM201AQ5SY85 155 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 Q6YL49 198 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 SPATA24Q86W54 205 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 TMEM86BQ8N661 226 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 OR4K13Q8NH42 304 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 WFDC12Q8WWY7 111 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 NMNAT3Q96T66 252 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 EGLN3Q9H6Z9 239 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 YY1AP1Q9H869 796 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 TMEM100Q9NV29 134 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 CLN8Q9UBY8 286 aa11.84□□□□□ -0.51
RPP40-201ENST00000319533 WNK1Q9H4A3 2382 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 IGLV1-36A0A0B4J1U3 117 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 FAM181BA6NEQ2 426 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 CST1P01037 141 aa11.83□□□□□ -0.52
RPP40-201ENST00000319533 GASTP01350 101 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms