RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 C9orf40Q8IXQ3 194 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 BCORP1Q8N888 145 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SUMF2Q8NBJ7 301 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OR14K1Q8NGZ2 314 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SECTM1Q8WVN6 248 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 C8orf44Q96CB5 159 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 NRTNQ99748 197 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FBXL17Q9UF56 701 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 MRPS18BQ9Y676 258 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PQU0 124 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 PMS2P1A4D2B8 440 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GPR3P46089 330 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 P2RY1P47900 373 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 PRRT3Q5FWE3 981 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GKN2Q86XP6 184 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OR13C9Q8NGT0 318 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 MFSD8Q8NHS3 518 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM234Q8WY98 164 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FGF14Q92915 247 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ANKRD9Q96BM1 317 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 MESP1Q9BRJ9 268 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SUCNR1Q9BXA5 334 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZMAT3Q9HA38 289 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 MSGN1A6NI15 193 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF587BE7ETH6 402 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SMAD9O15198 467 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DXOO77932 396 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 IL33O95760 270 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GPANK1O95872 356 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HBE1P02100 147 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SFTPBP07988 381 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 CT62P0C5K7 136 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 TMEM33P57088 247 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF117Q03924 483 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DMWDQ09019 674 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SSX2Q16385 188 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 CHRFAM7AQ494W8 412 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ACER2Q5QJU3 275 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SLC35D2Q76EJ3 337 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 BIVMQ86UB2 503 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 LHFPL1Q86WI0 220 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 RHBDD1Q8TEB9 315 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 MOGAT1Q96PD6 335 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SYT3Q9BQG1 590 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DOK5Q9P104 306 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DHCR7Q9UBM7 475 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 KIR2DS5A0A0G2JLQ3 304 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 A0A0G2JNG1 304 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FAM230AA0A1W2PPH8 454 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 KIR2DS3K7RE56 304 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 DRD3P35462 400 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 NPY4RP50391 375 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 SLC26A5P58743 744 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 NKX6-1P78426 367 aaPredicted RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 KIR2DS5Q14953 304 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 REC114Q7Z4M0 266 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 FAM24BQ8N5W8 94 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GTF3AQ92664 365 aaKnown RBP4.27□□□□□ -1.73
PTPN13-201ENST00000316707 NKD1Q969G9 470 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 TCTN2Q96GX1 697 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OR10A5Q9H207 317 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 HCFC1R1Q9NWW0 138 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 GDE1Q9NZC3 331 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 OSGIN2Q9Y236 505 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 LRP12Q9Y561 859 aa4.27□□□□□ -1.73
PTPN13-201ENST00000316707 ZNF638Q14966 1978 aaKnown RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OTOFQ9HC10 1997 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 FAM157AC9JC47 383 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 H7C1C5 153 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CLN5O75503 358 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 ADAP1O75689 374 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PNPP00491 289 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CEBPBP17676 345 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 FGF7P21781 194 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 LCN6P62502 163 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 INSM1Q01101 510 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 HGFACQ04756 655 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SKP2Q13309 424 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 GNMTQ14749 295 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SLC25A43Q8WUT9 341 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 EDARADDQ8WWZ3 215 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SLAMF9Q96A28 289 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SPIN2AQ99865 258 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SPIN2BQ9BPZ2 258 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 TWSG1Q9GZX9 223 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SRPK3Q9UPE1 567 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 A0A1W2PQD3 144 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 MPIG6BO95866 241 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 BGLAPP02818 100 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RAB4AP20338 218 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 SNCAP37840 140 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 OR2B8PP59922 312 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PKIAP61925 76 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 CSNK2A1P68400 391 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PNRC1Q12796 327 aaPredicted RBP4.26□□□□□ -1.73
PTPN13-201ENST00000316707 RSU1Q15404 277 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 PCK2Q16822 640 aa4.26□□□□□ -1.73
PTPN13-201ENST00000316707 AKR1C8PQ5T2L2 129 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms