RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CYTIPO60759 359 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 MRPL33O75394 65 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PTTG1O95997 202 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 IGFBP3P17936 291 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 GIFP27352 417 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 CCR9P51686 369 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PSMA6P60900 246 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 CDC20Q12834 499 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 HLXQ14774 488 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PDCD1Q15116 288 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FAM205BPQ63HN1 556 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF813Q6ZN06 617 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 GPR137CQ8N3F9 429 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 SLC22A24Q8N4F4 322 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 PAQR4Q8N4S7 273 aaPredicted RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 OR8S1Q8NH09 359 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 KCNE4Q8WWG9 221 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 MRPL48Q96GC5 212 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 FYTTD1Q96QD9 318 aaKnown RBP6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 NIPAL2Q9H841 368 aa6.12□□□□□ -1.43
LYSMD3-201ENST00000315948 APOA1P02647 267 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 CD46P15529 392 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 GDNFP39905 211 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 BLVRAP53004 296 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 FOXF2Q12947 444 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 UNC119Q13432 240 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TMEM69Q5SWH9 247 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 C10orf128Q5T292 105 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 HAS2Q92819 552 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 WDYHV1Q96HA8 205 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 RADILQ96JH8 1075 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 B3GNT4Q9C0J1 378 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 NUDT15Q9NV35 164 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ETAA1Q9NY74 926 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ABI3Q9P2A4 366 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 RBMX2Q9Y388 322 aaKnown RBP6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 BOLA1Q9Y3E2 137 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TRAV18A0A075B6X5 111 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 LOC100509620A0A075B734 347 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ISPDA4D126 451 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 M0R135 149 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SLC19A2O60779 497 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF24P17028 368 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 MAP2K3P46734 347 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ASAH1Q13510 395 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 POU4F3Q15319 338 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 UBE2V2Q15819 145 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 UBE2NLQ5JXB2 153 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF554Q86TJ5 538 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 OR5AS1Q8N127 324 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 BHLHE23Q8NDY6 225 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 CPNE4Q96A23 557 aaPredicted RBP6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF799Q96GE5 643 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 PGAM5Q96HS1 289 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 WNT5BQ9H1J7 359 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 B4GALT7Q9UBV7 327 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 STEAP1Q9UHE8 339 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 UTP20O75691 2785 aaKnown RBP6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TRGV5A0A0B4J1U4 118 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TMEM235A6NFC5 223 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 GJE1A6NN92 205 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 KLRC4-KLRK1H3BQV0 150 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 LRP3O75074 770 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 CTAG2O75638 210 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 VAMP5O95183 116 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 NGFP01138 241 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 CD1AP06126 327 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 CELA3BP08861 270 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 HTR5AP47898 357 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 PABPC1L2AQ5JQF8 200 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 BRICD5Q6PL45 260 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF627Q7L945 461 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ACOT12Q8WYK0 555 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SGK3Q96BR1 496 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 MNTQ99583 582 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ATG5Q9H1Y0 275 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SP140LQ9H930 580 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ZNF71Q9NQZ8 489 aaPredicted RBP6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 FAM240BA0A1B0GVZ2 78 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SGCEO43556 437 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SYNGR3O43761 229 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ANGPTL7O43827 346 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 LILRA1O75019 489 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ARSBP15848 533 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 HTR2CP28335 458 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 GUCA1AP43080 201 aaPredicted RBP6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 INPP1P49441 399 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TAS2R20P59543 309 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 DEFA1P59665 94 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 DEFA3P59666 94 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 TATDN3Q17R31 274 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ELFN2Q5R3F8 820 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SPATA46Q5T0L3 261 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 FAM166AQ6J272 317 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SLC16A14Q7RTX9 510 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 GVQW1Q8N7I0 195 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 OR4S1Q8NGB4 309 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 ENKURQ8TC29 256 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 SLITRK2Q9H156 845 aa6.11□□□□□ -1.43
LYSMD3-201ENST00000315948 GPR173Q9NS66 373 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms