RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 NME1P15531 152 aaKnown RBP12.42□□□□□ -0.42
SPAST-201ENST00000315285 FCGR2CP31995 323 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 SFTPA1Q8IWL2 248 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 C4orf45Q96LM5 186 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 MARVELD1Q9BSK0 173 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 DUSP13Q9UII6 198 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 EFSO43281 561 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 OR13C7P0DN81 318 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 LHFPL2Q6ZUX7 228 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 GALNT16Q8N428 558 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 LANCL2Q9NS86 450 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 SLC23A1Q9UHI7 598 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 SH3BGRL2Q9UJC5 107 aa12.42□□□□□ -0.42
SPAST-201ENST00000315285 TRIP12Q14669 1992 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 IGHV3-15A0A0B4J1V0 119 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 FAM221AA4D161 298 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 GRPP07492 148 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 CT62P0C5K7 136 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 MSL3P1P0C860 447 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 MYF5P13349 255 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 CD80P33681 288 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 GPR3P46089 330 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 HYAL1Q12794 435 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 ARHGEF39Q8N4T4 335 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 OR4A16Q8NH70 328 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 ST8SIA2Q92186 375 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 UBL7Q96S82 380 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 TINAGL1Q9GZM7 467 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 QSER1Q2KHR3 1735 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 RPL12P30050 165 aaKnown RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 RAG2P55895 527 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 PDZK1IP1Q13113 114 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 FAM74A1Q5RGS3 127 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 OR4S1Q8NGB4 309 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 OR10Z1Q8NGY1 313 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 GPBAR1Q8TDU6 330 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 C14orf79Q96F83 325 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 DYNLRB1Q9NP97 96 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 TSTD3H0UI37 97 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 HOXC4P09017 264 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 ADRA2CP18825 462 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 MVDP53602 400 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 UBE2IP63279 158 aaKnown RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 ST3GAL2Q16842 350 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 TCTN1Q2MV58 587 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 SPACA9Q96E40 222 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 REEP6Q96HR9 211 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 TRPM6Q9BX84 2022 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 POLR2AP24928 1970 aaKnown RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 NME2P1O60361 137 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 TAGLN2P37802 199 aaKnown RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 HOXA1P49639 335 aaPredicted RBP12.41□□□□□ -0.42
SPAST-201ENST00000315285 DMRTC1Q5HYR2 192 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 SPEM1Q8N4L4 309 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 DTWD2Q8NBA8 298 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 NOXO1Q8NFA2 376 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 OR11L1Q8NGX0 322 aa12.41□□□□□ -0.42
SPAST-201ENST00000315285 CDAP32320 146 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 CDKN2AP42771 156 aaKnown RBP12.4□□□□□ -0.42
SPAST-201ENST00000315285 TESK1Q15569 626 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 TMEM182Q6ZP80 229 aaPredicted RBP12.4□□□□□ -0.42
SPAST-201ENST00000315285 C17orf107Q6ZR85 190 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 C2orf50Q96LR7 162 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 PLK3Q9H4B4 646 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 OR5V1Q9UGF6 321 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 PCM1Q15154 2024 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 A0A087WZY1 265 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 LGALS8O00214 317 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 H2AFB1P0C5Y9 115 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 AANATQ16613 207 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 MRM1Q6IN84 353 aaKnown RBP12.4□□□□□ -0.42
SPAST-201ENST00000315285 TERB2Q8NHR7 220 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 CCDC74BQ96LY2 380 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 ABHD1Q96SE0 405 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 C20orf24Q9BUV8 137 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 RTL8AQ9BWD3 113 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 SLC17A5Q9NRA2 495 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 TRIM64BA6NI03 449 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 ZFP92A6NM28 416 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 SPINT2O43291 252 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 CBR1P16152 277 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 COL9A1P20849 921 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 ZNF141Q15928 474 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 CDONQ4KMG0 1287 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 Q6ZRG5 221 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 OR5AS1Q8N127 324 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 MTFP1Q9UDX5 166 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 ANKRD31Q8N7Z5 1873 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 IGHV5-51A0A0C4DH38 117 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.42
SPAST-201ENST00000315285 SCO1O75880 301 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 FAHP16930 419 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 OR8G2PQ6IF36 304 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 SAMD10Q9BYL1 202 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 VN1R1Q9GZP7 353 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 FAM234AQ9H0X4 552 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 TMEM231Q9H6L2 316 aa12.4□□□□□ -0.42
SPAST-201ENST00000315285 PRELID3BQ9Y3B1 194 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms