RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 GSTT1P30711 240 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 CD200P41217 278 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 PRKXP51817 358 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 BLVRAP53004 296 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 BTG1P62324 171 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 EFNB1P98172 346 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ATP6AP1Q15904 470 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF181Q2M3W8 571 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 KLHL12Q53G59 568 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 SPATC1Q76KD6 591 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ASRGL1Q7L266 308 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 PARP8Q8N3A8 854 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ATG16L2Q8NAA4 619 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 RAB39BQ96DA2 213 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 ZMYND19Q96E35 227 aaPredicted RBP12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 INTS14Q96SY0 518 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 GAL3ST1Q99999 423 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 COPS4Q9BT78 406 aa12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 POLR3KQ9Y2Y1 108 aaPredicted RBP12.26□□□□□ -0.45
PPP1CA-201ENST00000312989 PRR32B1ATL7 298 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 SELENOFO60613 162 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 FSTL3O95633 263 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 HNF1AP20823 631 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 EIF2B1Q14232 305 aaKnown RBP12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 PGAP1Q75T13 922 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF771Q7L3S4 317 aaPredicted RBP12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 ERI1Q8IV48 349 aaKnown RBP12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 CPOQ8IVL8 374 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 OR6N2Q8NGY6 317 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 OTOSQ8NHW6 89 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 Q8TCH9 128 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 DACT3Q96B18 629 aaPredicted RBP12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 GABARAPL1Q9H0R8 117 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 OR51V1Q9H2C8 321 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 YY1AP1Q9H869 796 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 PATZ1Q9HBE1 687 aaKnown RBP12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 CENPMQ9NSP4 180 aa12.25□□□□□ -0.45
PPP1CA-201ENST00000312989 ISPDA4D126 451 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 A8MXK9 166 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PRODHO43272 600 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 MITFO75030 526 aaPredicted RBP12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 CYB5R3P00387 301 aaPredicted RBP12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PNPP00491 289 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 SLC6A9P48067 706 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 CX3CR1P49238 355 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 CRISP1P54107 249 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PAX2Q02962 417 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 MPPED2Q15777 294 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 FAM201AQ5SY85 155 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PRAMEF6Q5VXH4 476 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 RHOUQ7L0Q8 258 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 MOGAT3Q86VF5 341 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 CELF2-AS1Q8N7Q2 184 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 DEFB108BQ8NET1 73 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 SPATA3Q8NHX4 192 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 DVL3Q92997 716 aaPredicted RBP12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 SGK3Q96BR1 496 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 MMADHCQ9H3L0 296 aaPredicted RBP12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 TMEM165Q9HC07 324 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 MMP26Q9NRE1 261 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PAPOLBQ9NRJ5 636 aaKnown RBP12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 TMEM100Q9NV29 134 aa12.24□□□□□ -0.45
PPP1CA-201ENST00000312989 PPIAL4EA0A075B759 164 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 LOC105371242A0A075B767 164 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PPIAL4CA0A0B4J2A2 164 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 hCG_38984A0A1B0GV85 526 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 CEACAM18A8MTB9 384 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PRR23D1E9PI22 279 aaPredicted RBP12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PPIAL4DF5H284 164 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 TRAPPC2LH3BP13 241 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF205O95201 554 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 HMGN1P05114 100 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 SBK2P0C263 348 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PRR23D2P0DMB1 279 aaPredicted RBP12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PPIAL4FP0DN26 164 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 CA6P23280 308 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 GRB2P62993 217 aaKnown RBP12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 FAM3AP98173 230 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 MALLQ13021 153 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PTGES3Q15185 160 aaKnown RBP12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 KDM4DQ6B0I6 523 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 MRPL21Q7Z2W9 205 aaKnown RBP12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 WDR86Q86TI4 376 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 OR56B2PQ8NGI1 322 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 OR5K1Q8NHB7 308 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 DNAJC9Q8WXX5 260 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 TOR3AQ9H497 397 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 PPP1R3EQ9H7J1 279 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 UBAP1Q9NZ09 502 aa12.23□□□□□ -0.45
PPP1CA-201ENST00000312989 RNF212BA8MTL3 300 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 M0R129 80 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 PRKYO43930 277 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 WNT2P09544 360 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 ANPEPP15144 967 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 ALOX5APP20292 161 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 PCMT1P22061 227 aa12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 SRP9P49458 86 aaKnown RBP12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 ZNF121P58317 390 aaPredicted RBP12.22□□□□□ -0.45
PPP1CA-201ENST00000312989 LCN2P80188 198 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms