RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 H7C417 338 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 I3L521 148 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 L7N2F9 121 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SULT1C2O00338 296 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CCL21O00585 134 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ADAM10O14672 748 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PHYHO14832 338 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 HOXA3O43365 443 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 GALR3O60755 368 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CTNSO60931 367 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TSC22D2O75157 780 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 AQP8O94778 261 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 GLCEO94923 617 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MPC2O95563 127 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NTN1O95631 604 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PPP1R3DO95685 299 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 WDPCPO95876 746 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TXNDC12O95881 172 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 HPP00738 406 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 IGHEP01854 428 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TFP02787 698 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MT-ND4P03905 459 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CSF1P09603 554 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 GKN3PP0CG01 181 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 UBL4AP11441 157 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SPI1P17947 270 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZP3P21754 424 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PRKACBP22694 351 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NFYAP23511 347 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 EDNRAP25101 427 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 GALNSP34059 522 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PTGER4P35408 488 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ACVR1BP36896 505 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PTH2RP49190 550 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CENPAP49450 140 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SRP9P49458 86 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CCR6P51684 374 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ART1P52961 327 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 BLVRAP53004 296 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PTTG1IPP53801 180 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SLC16A1P53985 500 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 RAB38P57729 211 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TSPAN5P62079 268 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 RPS4XP62701 263 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SKP1P63208 163 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 STX4Q12846 297 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 BIKQ13323 160 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MADCAM1Q13477 382 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 Q499Y3 187 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TP53I3Q53FA7 332 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TRMT12Q53H54 448 aaKnown RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 VWA2Q5GFL6 755 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TCTE1Q5JU00 501 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 FAM27D1Q5T7N8 215 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF626Q68DY1 528 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 FAM180AQ6UWF9 173 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 GFRALQ6UXV0 394 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 B3GLCTQ6Y288 498 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 Q6YL49 198 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 C3P1Q6ZMU1 363 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 RNF44Q7L0R7 432 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SLC16A9Q7RTY1 509 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 OVCH2Q7RTZ1 564 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 HSD17B13Q7Z5P4 300 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CDH26Q8IXH8 852 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF595Q8IYB9 648 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 FTMTQ8N4E7 242 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NPEPL1Q8NDH3 523 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 C7orf57Q8NEG2 295 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 DNAAF1Q8NEP3 725 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 OR51A7Q8NH64 312 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 OR52I2Q8NH67 350 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MOSPD2Q8NHP6 518 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 LGALS14Q8TCE9 139 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 STT3BQ8TCJ2 826 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SCARB1Q8WTV0 552 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 THEM6Q8WUY1 208 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 HAS2Q92819 552 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 SLC25A38Q96DW6 304 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 OMA1Q96E52 524 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZFP3Q96NJ6 502 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 DERL3Q96Q80 235 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TNFRSF13CQ96RJ3 184 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MACROD1Q9BQ69 325 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 HES7Q9BYE0 225 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 DNTTIP1Q9H147 329 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 POFUT1Q9H488 388 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NARFLQ9H6Q4 476 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 METTL17Q9H7H0 456 aaPredicted RBP4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NOX3Q9HBY0 568 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ADAP2Q9NPF8 381 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 NOX4Q9NPH5 578 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 CUTCQ9NTM9 273 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 TAS2R10Q9NYW0 307 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 FLRT3Q9NZU0 649 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 PIPOXQ9P0Z9 390 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ABI3Q9P2A4 366 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MGAT4CQ9UBM8 478 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 MTFP1Q9UDX5 166 aa4.33□□□□□ -1.72
CKS1B-201ENST00000308987 ZNF107Q9UII5 783 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms