RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 BHLHE23Q8NDY6 225 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR2AE1Q8NHA4 323 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 UBASH3BQ8TF42 649 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SPRYD4Q8WW59 207 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 UBE2FQ969M7 185 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RNFT2Q96EX2 444 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MRPL48Q96GC5 212 aaKnown RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MYCBPQ99417 103 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ADI1Q9BV57 179 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 EGLN1Q9GZT9 426 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MOB1AQ9H8S9 216 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NKX1-2Q9UD57 310 aaPredicted RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZDHHC8Q9ULC8 765 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GTF2A1LQ9UNN4 478 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NOP16Q9Y3C1 178 aaKnown RBP9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PCDHGB1Q9Y5G3 927 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DYSFO75923 2080 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MED13LQ71F56 2210 aa9.39□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZSCAN5BA6NJL1 495 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NDUFS8O00217 210 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DLGAP1O14490 977 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IGHV1-46P01743 117 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DBTP11182 482 aaKnown RBP9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CD99P14209 185 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SLC25A16P16260 332 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MAGEB1P43366 347 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CCL8P80075 99 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TNFAIP6P98066 277 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF92Q03936 586 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF91Q05481 1191 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TNK1Q13470 666 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IL18R1Q13478 541 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SNCBQ16143 134 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 COMMD2Q86X83 199 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 C8orf59Q8N0T1 100 aaPredicted RBP9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RFLNBQ8N5W9 214 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 YIPF7Q8N8F6 280 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR8G5Q8NG78 346 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR2Z1Q8NG97 314 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GTF3AQ92664 365 aaKnown RBP9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ELMOD3Q96FG2 381 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 REEP6Q96HR9 211 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RGCCQ9H4X1 137 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MSL2Q9HCI7 577 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NKIRAS2Q9NYR9 191 aa9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RPL36Q9Y3U8 105 aaKnown RBP9.38□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TMEM269A0A1B0GVZ9 245 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LOC390937A0A1W2PQ73 354 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 A0A1W2PQL4 384 aaPredicted RBP9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DAPL1A0PJW8 107 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IRGMA1A4Y4 181 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TRIM64A6NGJ6 449 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TRIM64BA6NI03 449 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ACOD1A6NK06 481 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 LOC110117498-PIK3R3F6TDL0 507 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 H0YAE9 185 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 H7C1Q1 480 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 NCR1O76036 304 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CLIC3O95833 236 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 HPXP02790 462 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 GABRB1P18505 474 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DCTDP32321 178 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ROM1Q03395 351 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TMEM255AQ5JRV8 349 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FTMTQ8N4E7 242 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF540Q8NDQ6 660 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR13G1Q8NGZ3 307 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RHOXF1Q8NHV9 184 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RDH5Q92781 318 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SLC22A4Q9H015 551 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TMEM100Q9NV29 134 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 AASSQ9UDR5 926 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ZNF391Q9UJN7 358 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 HSPE1-MOB4S4R3N1 261 aa9.37□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IGHV4-30-2A0A087WSY4 118 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 IGHV1-69-2A0A0G2JMI3 117 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 METTL15A6NJ78 407 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CD300LBA8K4G0 201 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 SMAD7O15105 426 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RPP14O95059 124 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ATP6V1G2O95670 118 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 FADS2O95864 444 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CD55P08174 381 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ADH4P08319 380 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 TNFRSF1AP19438 455 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ACHEP22303 614 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 DDOSTP39656 456 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 AQP4P55087 323 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 PRSS12P56730 875 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ACTA2P62736 377 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ACTG2P63267 376 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 ADARB1P78563 741 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 MRPS11P82912 194 aaKnown RBP9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 RAB40BQ12829 278 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 CDK5R2Q13319 367 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 OR8G1Q15617 311 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 HFEQ30201 348 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 KLHL22Q53GT1 634 aa9.36□□□□□ -0.91
CSPG4P1Y-201ENST00000306641 BCL2L15Q5TBC7 163 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms