RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF695Q8IW36 515 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 OR4Q3Q8NH05 313 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 C4orf45Q96LM5 186 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 JAM3Q9BX67 310 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 MS4A5Q9H3V2 200 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 KCNMB2Q9Y691 235 aa8.23□□□□□ -1.09
PTPRE-202ENST00000306042 CBFA2T3O75081 653 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 WBP4O75554 376 aaKnown RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SNAPC5O75971 98 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 FAHP16930 419 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 TBR1Q16650 682 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CNIH2Q6PI25 160 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CREB3L2Q70SY1 520 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CXorf67Q86X51 503 aaPredicted RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SGPP2Q8IWX5 399 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 RDH5Q92781 318 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 DPF1Q92782 380 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 FAM3DQ96BQ1 224 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 OR8B4Q96RC9 309 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 EHFQ9NZC4 300 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SMCO3A2RU48 225 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 OR6C68A6NDL8 312 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 NCR1O76036 304 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CDKN2AP42771 156 aaKnown RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 ETV1P50549 477 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 TAS2R46P59540 309 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 GNG3P63215 75 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 MEX3BQ6ZN04 569 aaKnown RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 TSEN54Q7Z6J9 526 aaKnown RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 OR51D1Q8NGF3 324 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 OR6Q1Q8NGQ2 317 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 RHNO1Q9BSD3 238 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SFXN3Q9BWM7 321 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 LRP12Q9Y561 859 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 MEIKINA0A087WXM9 373 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 TRBV5-3A0A0A0MS03 114 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CENPVL1A0A0U1RR11 272 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CA6P23280 308 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 PTAFRP25105 342 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SFRP4Q6FHJ7 346 aaPredicted RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 ADGRE4PQ86SQ3 457 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CHPT1Q8WUD6 406 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CMBLQ96DG6 245 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF285Q96NJ3 590 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 MYOZ1Q9NP98 299 aaPredicted RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 CYSLTR2Q9NS75 346 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 NUDT15Q9NV35 164 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 RAB22AQ9UL26 194 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 HLA-DMAP28067 261 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 MTNR1BP49286 362 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 ISL1P61371 349 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 DBPQ10586 325 aaPredicted RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 TSPO2Q5TGU0 170 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 THSD4Q6ZMP0 1018 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 NANOGP1Q8N7R0 232 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 OR2G2Q8NGZ5 317 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF385AQ96PM9 386 aaKnown RBP8.22□□□□□ -1.09
PTPRE-202ENST00000306042 SPACA5Q96QH8 159 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 MBOAT4Q96T53 435 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 BANF2Q9H503 90 aa8.22□□□□□ -1.09
PTPRE-202ENST00000306042 RNF212BA8MTL3 300 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 ERVH48-1M5A8F1 160 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 HAX1O00165 279 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 CDC42EP2O14613 210 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 BCAS1O75363 584 aaPredicted RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 PET100P0DJ07 73 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 SNRPBP14678 240 aaKnown RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 ACAA2P42765 397 aaKnown RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 GPM6AP51674 278 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 FUT6P51993 359 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 AP2S1P53680 142 aaPredicted RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 MEF2DQ14814 521 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 AGAP6Q5VW22 663 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 OR4D6Q8NGJ1 314 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 OR10K1Q8NGX5 313 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 PP6455Q8WZ26 134 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 ST8SIA4Q92187 359 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 SNAPC3Q92966 411 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 DOK1Q99704 481 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 CACNG6Q9BXT2 260 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF552Q9H707 407 aaPredicted RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 LIN7BQ9HAP6 207 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 ZNF355PQ9NSJ1 428 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 PCDHGA9Q9Y5G4 932 aaKnown RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 LIPGQ9Y5X9 500 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 NLRC5Q86WI3 1866 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 TECTAO75443 2155 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 INMT-MINDY4F8WBC2 141 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 SMPD2O60906 423 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 BGLAPP02818 100 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 CALCBP10092 127 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 EPHA1P21709 976 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 HMGA2P52926 109 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 NDUFA5Q16718 116 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 OR6S1Q8NH40 331 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 KCTD12Q96CX2 325 aaKnown RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 AKR1E2Q96JD6 320 aa8.21□□□□□ -1.09
PTPRE-202ENST00000306042 NKX3-1Q99801 234 aaPredicted RBP8.21□□□□□ -1.09
PTPRE-202ENST00000306042 TUBD1Q9UJT1 453 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms