RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 SLC16A11Q8NCK7 471 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 RGP1Q92546 391 aaPredicted RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 PHYHIPQ92561 330 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 AICDAQ9GZX7 198 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 PADI1Q9ULC6 663 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 MEMO1Q9Y316 297 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ADAM18Q9Y3Q7 739 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 MMACHCQ9Y4U1 282 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 IER3IP1Q9Y5U9 82 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 EYSQ5T1H1 3165 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 PET100P0DJ07 73 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 FABP4P15090 132 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 SPCS3P61009 180 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 PRSS53Q2L4Q9 553 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 FAM180AQ6UWF9 173 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 STAC2Q6ZMT1 411 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 REC114Q7Z4M0 266 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 COMTD1Q86VU5 262 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 LSRQ86X29 649 aaPredicted RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 OR5AP2Q8NGF4 316 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 DIO2Q92813 273 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 TMEM106AQ96A25 262 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 CST11Q9H112 138 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 ALX4Q9H161 411 aaPredicted RBP9.8□□□□□ -0.84
LSM3-201ENST00000306024 TAF9BQ9HBM6 251 aa9.8□□□□□ -0.84
LSM3-201ENST00000306024 REV3LO60673 3130 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 TRAV14DV4A0A0A6YYC5 116 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 IGHV3-20A0A0C4DH32 117 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 A0A1W2PPE2 198 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 IDSB3KWA1 339 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 SULT2B1O00204 365 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 XRCC3O43542 346 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 OR6A2O95222 327 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 SERPINF1P36955 418 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 GSK3AP49840 483 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF84P51523 738 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 CFHR1Q03591 330 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 IL10RAQ13651 578 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 Q499Y3 187 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 SLC36A1Q7Z2H8 476 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 DND1Q8IYX4 353 aaKnown RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 OR56B1Q8NGI3 324 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF417Q8TAU3 575 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 NUDCD2Q8WVJ2 157 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 APOBEC4Q8WW27 367 aaKnown RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 PGLYRP3Q96LB9 341 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 PRRT1Q99946 306 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 PBDC1Q9BVG4 233 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF700Q9H0M5 742 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 CCDC86Q9H6F5 360 aaKnown RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 TBX19O60806 448 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 MT-CO3P00414 261 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 CD96P40200 585 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 NOVA1P51513 510 aaKnown RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 CAV2P51636 162 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 STPG1Q5TH74 334 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 OR1J1Q8NGS3 322 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 OR13C9Q8NGT0 318 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 SLC39A7Q92504 469 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF501Q96CX3 271 aaPredicted RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 DNAJA3Q96EY1 480 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 TNFRSF13CQ96RJ3 184 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 LRFN3Q9BTN0 628 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 DEFB126Q9BYW3 111 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ADGRL4Q9HBW9 690 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 RXFP3Q9NSD7 469 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 LPAR3Q9UBY5 353 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ACACAQ13085 2346 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF726A6NNF4 738 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 QDPRP09417 244 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 ZNF883P0CG24 379 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 DNASE1L1P49184 302 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 MECP2P51608 486 aaKnown RBP9.79□□□□□ -0.84
LSM3-201ENST00000306024 SLC9A3R2Q15599 337 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 MFSD12Q6NUT3 480 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 TMEM64Q6YI46 380 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 OR6N2Q8NGY6 317 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 PIK3IP1Q96FE7 263 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 LAMP5Q9UJQ1 280 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 FBXO7Q9Y3I1 522 aa9.79□□□□□ -0.84
LSM3-201ENST00000306024 NPIPA5A0A0B4J1W7 369 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 TMEM272A0A1B0GTI8 110 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 CDC14CA4D256 554 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 NPIPA7E9PJI5 369 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 PEX12O00623 359 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 GDF9O60383 454 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 HEXAP06865 529 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 NPIPA8P0DM63 369 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 FOLR3P41439 243 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 SURF2Q15527 256 aaPredicted RBP9.78□□□□□ -0.84
LSM3-201ENST00000306024 SOHLH1Q5JUK2 328 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 TEX30Q5JUR7 227 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 HIST2H3PS2Q5TEC6 136 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 NSUN5P2Q63ZY6 315 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 GATSQ8NAP1 163 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 SUMF2Q8NBJ7 301 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 TMEM52Q8NDY8 209 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 TMEM68Q96MH6 324 aa9.78□□□□□ -0.84
LSM3-201ENST00000306024 CNTNAP3Q9BZ76 1288 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms