RNA–Protein interactions for RNA: ENST00000305481.10

USP47-201, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 1 (best)

Gene USP47, Length 3,577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-201ENST00000305481 A6NL46 340 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 F5H5K5 113 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ITGB2P05107 769 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 SP1P08047 785 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 TCF15Q12870 199 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 UNC119Q13432 240 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 GSG1Q2KHT4 349 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 HYAL4Q2M3T9 481 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ZFP69Q49AA0 526 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ELFN2Q5R3F8 820 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OLFML2AQ68BL7 652 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 AAED1Q7RTV5 226 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 GALNT16Q8N428 558 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 TMEM251Q8N6I4 163 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CLEC1AQ8NC01 280 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 OR4D10Q8NGI6 311 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 C15orf40Q8WUR7 153 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 CPNE4Q96A23 557 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 PNPLA2Q96AD5 504 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ZNF486Q96H40 463 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 FAM71F1Q96KD3 344 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 IP6K3Q96PC2 410 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 SORCS2Q96PQ0 1159 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 ALKBH3Q96Q83 286 aaPredicted RBP5.75□□□□□ -1.49
USP47-201ENST00000305481 SPACA5Q96QH8 159 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 DIABLOQ9NR28 239 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 COPZ2Q9P299 210 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 FRYQ5TBA9 3013 aa5.75□□□□□ -1.49
USP47-201ENST00000305481 MEIS3P1A6NDR6 274 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 PATE4P0C8F1 98 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ZNF708P17019 499 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 RAB3AP20336 220 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ZNF84P51523 738 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 CTAG1AP78358 180 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 IFITM2Q01629 132 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 HGFACQ04756 655 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 SRYQ05066 204 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 GFOD2Q3B7J2 385 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 DMRTC1Q5HYR2 192 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 CRIP3Q6Q6R5 217 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 GALNTL5Q7Z4T8 443 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ADGRE4PQ86SQ3 457 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 COMMD2Q86X83 199 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 TCTE3Q8IZS6 198 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 GPR137CQ8N3F9 429 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 OR14K1Q8NGZ2 314 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 FGFBP3Q8TAT2 258 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 AKAP1Q92667 903 aaKnown RBP eCLIP5.74□□□□□ -1.49
USP47-201ENST00000305481 FOXRED1Q96CU9 486 aaPredicted RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 FER1L6-AS2Q96M78 137 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 C20orf85Q9H1P6 137 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 TP63Q9H3D4 680 aaPredicted RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 METTL17Q9H7H0 456 aaPredicted RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 TMEM38BQ9NVV0 291 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ABI3Q9P2A4 366 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ZNF407Q9C0G0 2248 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 IGKV1-9A0A0C4DH69 117 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 LINC01387J3KSC0 135 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 NME2P1O60361 137 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 FCER2P06734 321 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 H2AFB2P0C5Z0 115 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 B4GALT1P15291 398 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 PSMB1P20618 241 aaKnown RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 NME2P22392 152 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 CRYGSP22914 178 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 RAG2P55895 527 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ST3GAL2Q16842 350 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 BEST4Q8NFU0 473 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 OR11H7Q8NGC8 314 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 CPT1CQ8TCG5 803 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 GPX8Q8TED1 209 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 SSC4DQ8WTU2 575 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 PTX4Q96A99 478 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 SEH1LQ96EE3 360 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 C1orf147Q96MC9 270 aaPredicted RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 ZMAT3Q9HA38 289 aaKnown RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 BEX1Q9HBH7 125 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 ASCL3Q9NQ33 180 aa5.74□□□□□ -1.49
USP47-201ENST00000305481 PRRC2CQ9Y520 2896 aaKnown RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 CNOT1A5YKK6 2376 aaKnown RBP5.74□□□□□ -1.49
USP47-201ENST00000305481 IGKV3D-15A0A087WSY6 115 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 ARGFXA6NJG6 315 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SYNGR3O43761 229 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RBBP9O75884 186 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 DHFRP00374 187 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 HPXP02790 462 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 VSIG8P0DPA2 414 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 WT1P19544 449 aaPredicted RBP5.73□□□□□ -1.49
USP47-201ENST00000305481 AP3S2P59780 193 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PMPCAQ10713 525 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 FCN2Q15485 313 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 PCGF3Q3KNV8 242 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SNAI3Q3KNW1 292 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 LINC00303Q3SY05 128 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SFRP5Q5T4F7 317 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 Q6ZSR3 168 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 DOK3Q7L591 496 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 RTN4RL2Q86UN3 420 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 VASH2Q86V25 355 aa5.73□□□□□ -1.49
USP47-201ENST00000305481 SLC22A24Q8N4F4 322 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms