RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LRP3O75074 770 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 TXNDC12O95881 172 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 OR5H8P0DN80 308 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 GLB1P16278 677 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 LYG2Q86SG7 212 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 TMEM123Q8N131 208 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 EXD3Q8N9H8 876 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 FBXW5Q969U6 566 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 GZMKP49863 264 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 CLN3Q13286 438 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF239Q16600 458 aaKnown RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 CCDC190Q86UF4 302 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 THNSL2Q86YJ6 484 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF680Q8NEM1 530 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 A0A1W2PPH5 198 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 CNIH1O95406 144 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 LCN15Q6UWW0 184 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 UBE2IP63279 158 aaKnown RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 DMRTC1Q5HYR2 192 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 ANKRD16Q6P6B7 361 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 ZNF573Q86YE8 665 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 KCNE4Q8WWG9 221 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 BOD1Q96IK1 185 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 PLSCR3Q9NRY6 295 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 SCN7AQ01118 1682 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 TNRC6CQ9HCJ0 1690 aaKnown RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 XRCC3O43542 346 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 MMP15P51511 669 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 IL10RAQ13651 578 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 GPNMBQ14956 572 aa12.6□□□□□ -0.39
PRKCB-201ENST00000303531 SAT2Q96F10 170 aaPredicted RBP12.6□□□□□ -0.39
PRKCB-201ENST00000303531 E5RGE8 158 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 FLI1Q01543 452 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 FAM185AQ8N0U4 392 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 EGLN1Q9GZT9 426 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PLEKHB1Q9UF11 243 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 NSG2Q9Y328 171 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 MEIKINA0A087WXM9 373 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 TRAF3IP2O43734 574 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 CLDN15P56746 228 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 FZD2Q14332 565 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PRDM7Q9NQW5 492 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 B4GALT1P15291 398 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PPIAP62937 165 aaKnown RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 LINC00303Q3SY05 128 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 C17orf107Q6ZR85 190 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 ETFBKMTQ8IXQ9 262 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 GPX8Q8TED1 209 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 ADAM10O14672 748 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 MGMTP16455 207 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 GPR12P47775 334 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 GUCA2AQ02747 115 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 LHX8Q68G74 356 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 MSRB3Q8IXL7 192 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 KLF13Q9Y2Y9 288 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PPP5D1E7EU14 171 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 LINC01565O15544 149 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PIGPP57054 158 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 PDZD11Q5EBL8 140 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 CISD2Q8N5K1 135 aaKnown RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 STRAPQ9Y3F4 350 aaKnown RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 FAM157BP0CG42 384 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 GLRA1P23415 457 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 XAF1Q6GPH4 301 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 KTI12Q96EK9 354 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 CCDC74BQ96LY2 380 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 UBE2ZQ9H832 354 aaPredicted RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 TTC3P53804 2025 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 HAAOP46952 286 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 WNT3P56703 355 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 DMWDQ09019 674 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 FAM74A1Q5RGS3 127 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 C2orf50Q96LR7 162 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 TRIB1Q96RU8 372 aa12.59□□□□□ -0.39
PRKCB-201ENST00000303531 SLIRPQ9GZT3 109 aaKnown RBP12.59□□□□□ -0.39
PRKCB-201ENST00000303531 CDK5RAP2Q96SN8 1893 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 SRFP11831 508 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 CDAP32320 146 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 PPP1R1CQ8WVI7 109 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 PLEKHA2Q9HB19 425 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 IL20Q9NYY1 176 aa12.58□□□□□ -0.39
PRKCB-201ENST00000303531 A0A087WUJ7 227 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 DVL1O14640 695 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 IAPPP10997 89 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 DVL1P1P54792 670 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 SLC25A26Q70HW3 274 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 WDR89Q96FK6 387 aaPredicted RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 ST3GAL6Q9Y274 331 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 K7EQM0 130 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 SUB1P53999 127 aaKnown RBP eCLIP12.58□□□□□ -0.41e-6■■■■■ 29.9
PRKCB-201ENST00000303531 RPS23P62266 143 aaKnown RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 BAP18Q8IXM2 172 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 SLC35E1Q96K37 410 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 H7BYZ3 331 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 RFC3P40938 356 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 ELFN2Q5R3F8 820 aa12.58□□□□□ -0.4
PRKCB-201ENST00000303531 RPUSD3Q6P087 351 aaKnown RBP12.58□□□□□ -0.4
PRKCB-201ENST00000303531 OR8U1Q8NH10 309 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms