RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 GPX5O75715 221 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 MPZL1O95297 269 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 ABHD16AO95870 558 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 CELP19835 753 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 PCBD1P61457 104 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 LSM3P62310 102 aaKnown RBP18.22■□□□□ 0.51
SMCO4-201ENST00000298966 CDK5R1Q15078 307 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 TAB1Q15750 504 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 MEP1BQ16820 701 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 CEACAM16Q2WEN9 425 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 DMKNQ6E0U4 476 aaPredicted RBP18.22■□□□□ 0.51
SMCO4-201ENST00000298966 ZC3HAV1Q7Z2W4 902 aaKnown RBP18.22■□□□□ 0.51
SMCO4-201ENST00000298966 NDNFQ8TB73 568 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 RPS4Y2Q8TD47 263 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 NABP1Q96AH0 204 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 SMIM19Q96E16 107 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 ALKBH3Q96Q83 286 aaPredicted RBP18.22■□□□□ 0.51
SMCO4-201ENST00000298966 KCNN2Q9H2S1 579 aa18.22■□□□□ 0.51
SMCO4-201ENST00000298966 MRM2Q9UI43 246 aaKnown RBP18.22■□□□□ 0.51
SMCO4-201ENST00000298966 LOC100506127A0A0U1RQW1 187 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 TRDV1A0A1B0GX56 115 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF878C9JN71 531 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 SERPINA3P01011 423 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 CD8AP01732 235 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 ZNF182P17025 639 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-201ENST00000298966 DSCR9P59020 149 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 BSPH1Q075Z2 132 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 LOXL1Q08397 574 aaPredicted RBP18.21■□□□□ 0.51
SMCO4-201ENST00000298966 SCRN3Q0VDG4 424 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 TSC22D1Q15714 1073 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 SGCAQ16586 387 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 SFRP5Q5T4F7 317 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 LIPNQ5VXI9 398 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 FBXW9Q5XUX1 488 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 CLEC2AQ6UVW9 174 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 DTX2Q86UW9 622 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 GABRG1Q8N1C3 465 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 DYNC2LI1Q8TCX1 351 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 THRSPQ92748 146 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 FOXN4Q96NZ1 517 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 USB1Q9BQ65 265 aaKnown RBP18.21■□□□□ 0.51
SMCO4-201ENST00000298966 CENPOQ9BU64 300 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 SLC7A10Q9NS82 523 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 ACOXLQ9NUZ1 547 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 CISD1Q9NZ45 108 aaKnown RBP18.21■□□□□ 0.51
SMCO4-201ENST00000298966 LHFPL6Q9Y693 200 aa18.21■□□□□ 0.51
SMCO4-201ENST00000298966 A0A096LNT2 108 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 E9PI62 339 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 OR8G3PP0DMU2 310 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 FGF9P31371 208 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 CDAP32320 146 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 CCR9P51686 369 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 RPS25P62851 125 aaKnown RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 HIST1H3AP68431 136 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 HIST2H3PS2Q5TEC6 136 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 HIST2H3AQ71DI3 136 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 NUFIP2Q7Z417 695 aaKnown RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 ZSCAN2Q7Z7L9 614 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 ZFP41Q8N8Y5 198 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 SLAMF6Q96DU3 332 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 DCSTAMPQ9H295 470 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 ELOVL3Q9HB03 270 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 EMC7Q9NPA0 242 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 SLCO1C1Q9NYB5 712 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 GSTK1Q9Y2Q3 226 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 SIRT4Q9Y6E7 314 aaPredicted RBP18.2■□□□□ 0.5
SMCO4-201ENST00000298966 PLCE1Q9P212 2302 aa18.2■□□□□ 0.5
SMCO4-201ENST00000298966 PRR32B1ATL7 298 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 APOC1P02654 83 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 H2BFMP0C1H6 154 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 EDNRAP25101 427 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 MPGP29372 298 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 GRB2P62993 217 aaKnown RBP18.19■□□□□ 0.5
SMCO4-201ENST00000298966 ECH1Q13011 328 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 ENDOGQ14249 297 aaKnown RBP18.19■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF829Q3KNS6 432 aaPredicted RBP18.19■□□□□ 0.5
SMCO4-201ENST00000298966 KLHL24Q6TFL4 600 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 SLC22A24Q8N4F4 322 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 PHYHIPQ92561 330 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 ZNF416Q9BWM5 594 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 MOB1AQ9H8S9 216 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 EXOSC4Q9NPD3 245 aaKnown RBP18.19■□□□□ 0.5
SMCO4-201ENST00000298966 ASH2LQ9UBL3 628 aa18.19■□□□□ 0.5
SMCO4-201ENST00000298966 TRBV2A0A0J9YWF9 115 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 DPRXA6NFQ7 191 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 PSKH1P11801 424 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 SLC25A16P16260 332 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 SRD5A1P18405 259 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 OPRL1P41146 370 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 RPS27P42677 84 aaKnown RBP18.18■□□□□ 0.5
SMCO4-201ENST00000298966 ALKBH1Q13686 389 aaKnown RBP18.18■□□□□ 0.5
SMCO4-201ENST00000298966 DGUOKQ16854 277 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 AGAP6Q5VW22 663 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 CYB5R2Q6BCY4 276 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 ARL9Q6T311 187 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 LRRN1Q6UXK5 716 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 TFAP2EQ6VUC0 442 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 LINC00346Q8IVM7 164 aa18.18■□□□□ 0.5
SMCO4-201ENST00000298966 UBE2J2Q8N2K1 259 aa18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms