RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SIAH3Q8IW03 269 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 KCNJ15Q99712 375 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 SRRQ9GZT4 340 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 CALHM2Q9HA72 323 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 GP6Q9HCN6 339 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 PLSCR2Q9NRY7 297 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 HSPB11Q9Y547 144 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 V9GY05 133 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 CIB4A0PJX0 185 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 FABP12A6NFH5 140 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 IFITM5A6NNB3 132 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 H3BSH0 61 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 RPL36A-HNRNPH2H7BZ11 118 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 SLC22A5O76082 557 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ACSM4P0C7M7 580 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 PRKXP51817 358 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 BAMBIQ13145 260 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ASPHD2Q6ICH7 369 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 CNIH2Q6PI25 160 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ADGRE4PQ86SQ3 457 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 MCEMP1Q8IX19 187 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 SPACA3Q8IXA5 215 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 SLC7A10Q9NS82 523 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 ZNF224Q9NZL3 707 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 CLEC4AQ9UMR7 237 aa13.65□□□□□ -0.22
LSM6-201ENST00000296581 SPTBN2O15020 2390 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 ZFHX4Q86UP3 3567 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 AIPO00170 330 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 TGM6O95932 706 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 CD2P06729 351 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 FSTP19883 344 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 CX3CR1P49238 355 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 ELFN2Q5R3F8 820 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 FAM131AQ6UXB0 335 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 SLC22A24Q8N4F4 322 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 TRMT10AQ8TBZ6 339 aaKnown RBP13.64□□□□□ -0.23
LSM6-201ENST00000296581 TAAR6Q96RI8 345 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 BRD7Q9NPI1 651 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 A0A0B4J293 547 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 ZNF98A6NK75 572 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 SLC22A20A6NK97 555 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 P2RY10O00398 339 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 FCGR2AP12318 317 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 B4GALT1P15291 398 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 ELK1P19419 428 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 PTBP1P26599 531 aaKnown RBP eCLIP13.64□□□□□ -0.23
LSM6-201ENST00000296581 OTX1P32242 354 aaPredicted RBP13.64□□□□□ -0.23
LSM6-201ENST00000296581 ZNF121P58317 390 aaPredicted RBP13.64□□□□□ -0.23
LSM6-201ENST00000296581 PRSS45Q7RTY3 260 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
LSM6-201ENST00000296581 ZNF433Q8N7K0 673 aaPredicted RBP13.64□□□□□ -0.23
LSM6-201ENST00000296581 OR8H1Q8NGG4 311 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 APH1AQ96BI3 265 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 FOXJ3Q9UPW0 622 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 SLC5A6Q9Y289 635 aa13.64□□□□□ -0.23
LSM6-201ENST00000296581 TTLL8A6PVC2 850 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 DOK2O60496 412 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 KRT33AO76009 404 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 WISP2O76076 250 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 IGFBP3P17936 291 aaPredicted RBP13.63□□□□□ -0.23
LSM6-201ENST00000296581 S100A12P80511 92 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 RAB35Q15286 201 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 SAMD12Q8N8I0 201 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 OR52H1Q8NGJ2 320 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 OR13C3Q8NGS6 347 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 UBASH3BQ8TF42 649 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 WACQ9BTA9 647 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 PPP1R3EQ9H7J1 279 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 CYSLTR2Q9NS75 346 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 DKK4Q9UBT3 224 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 FREM1Q5H8C1 2179 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 ASPMQ8IZT6 3477 aa13.63□□□□□ -0.23
LSM6-201ENST00000296581 A0A1B0GTI1 187 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 APC2O95996 2303 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 IGHV3-9P01782 118 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 CFPP27918 469 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 EIF2S3P41091 472 aaKnown RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 SCRN3Q0VDG4 424 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 AANATQ16613 207 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 RSPO1Q2MKA7 263 aaPredicted RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 ZNF627Q7L945 461 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 NUFIP2Q7Z417 695 aaKnown RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 ZNF283Q8N7M2 679 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 GDPD1Q8N9F7 314 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 OR8B12Q8NGG6 310 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 AKAP1Q92667 903 aaKnown RBP eCLIP13.62□□□□□ -0.23
LSM6-201ENST00000296581 HDHD2Q9H0R4 259 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 PLEK2Q9NYT0 353 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 CLCF1Q9UBD9 225 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 SPATA2Q9UM82 520 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 ARHGAP21Q5T5U3 1957 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 EIF4EP06730 217 aaKnown RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 SNRPBP14678 240 aaKnown RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 HES5Q5TA89 166 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 RBMXL3Q8N7X1 1067 aaKnown RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 SARAFQ96BY9 339 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 CMTM3Q96MX0 182 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 MRI1Q9BV20 369 aa13.62□□□□□ -0.23
LSM6-201ENST00000296581 KLF2Q9Y5W3 355 aaPredicted RBP13.62□□□□□ -0.23
LSM6-201ENST00000296581 A0A0B4J203 849 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms