RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 APOBEC3DQ96AK3 386 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 PGAM5Q96HS1 289 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 LYZL4Q96KX0 146 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 ACOD1A6NK06 481 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 TBX1O43435 398 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 IGLV3-1P01715 115 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 NR4A1P22736 598 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 NR1H2P55055 460 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 PRSS12P56730 875 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 GLYATL3Q5SZD4 288 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 BCL2L15Q5TBC7 163 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 MEX3BQ6ZN04 569 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 OR52H1Q8NGJ2 320 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 OR10AC1Q8NH08 325 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 RGP1Q92546 391 aaPredicted RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 HS3ST6Q96QI5 342 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 ESRP2Q9H6T0 727 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 MOB1AQ9H8S9 216 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 VCX3AQ9NNX9 186 aa18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 SF3B6Q9Y3B4 125 aaKnown RBP18.79■□□□□ 0.6
PDLIM3-203ENST00000284771 DOPEY2Q9Y3R5 2298 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 A0A1B0GTI1 187 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 H3BSH0 61 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 CASKO14936 926 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 RGS6P49758 472 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 RPS11P62280 158 aaKnown RBP eCLIP18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 NKX6-1P78426 367 aaPredicted RBP18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 ZNF92Q03936 586 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 OR51A4Q8NGJ6 313 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 OR51E1Q8TCB6 317 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 SLC24A3Q9HC58 644 aa18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 EIF3KQ9UBQ5 218 aaKnown RBP18.78■□□□□ 0.6
PDLIM3-203ENST00000284771 P2RY10O00398 339 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 GPRIN2O60269 458 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 PLAUP00749 431 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 MAGEB1P43366 347 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 GPR50Q13585 617 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 HLXQ14774 488 aaPredicted RBP18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 MSMPQ1L6U9 139 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 GFOD2Q3B7J2 385 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 BEX5Q5H9J7 111 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 SPATA46Q5T0L3 261 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 ADAM5Q6NVV9 412 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 OR5AK2Q8NH90 309 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 FAM222BQ8WU58 562 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 UFD1Q92890 307 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 RADILQ96JH8 1075 aa18.77■□□□□ 0.6
PDLIM3-203ENST00000284771 A0A0U1RQV5 110 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 SHISA9B4DS77 424 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 TGFBR2P37173 567 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 RAD52P43351 418 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 GK2Q14410 553 aaPredicted RBP18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 OR1J1Q8NGS3 322 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 OR13F1Q8NGS4 319 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 OR13C5Q8NGS8 318 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 TMEM203Q969S6 136 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 OR2J1Q9GZK6 312 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 OR10A2Q9H208 303 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 GPR84Q9NQS5 396 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 TMEM212A6NML5 194 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 ISG15P05161 165 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 CD1AP06126 327 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 RPL5P46777 297 aaKnown RBP18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 PPP1CBP62140 327 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 TNK1Q13470 666 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 INSL4Q14641 139 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 TMEM255AQ5JRV8 349 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 SLC22A25Q6T423 547 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 ZNF676Q8N7Q3 588 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 SLC25A40Q8TBP6 338 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 NEUROG1Q92886 237 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 SPSB4Q96A44 273 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 PIK3IP1Q96FE7 263 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 REEP6Q96HR9 211 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 SPOCK3Q9BQ16 436 aa18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 HRNRQ86YZ3 2850 aaPredicted RBP18.76■□□□□ 0.59
PDLIM3-203ENST00000284771 DCHS2Q6V1P9 2916 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 J3QW42 95 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 CCRL2O00421 344 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 RPS25P62851 125 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 SNTB2Q13425 540 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 KBTBD8Q8NFY9 601 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 LILRB1Q8NHL6 650 aaPredicted RBP18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 MARS2Q96GW9 593 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 KCNS3Q9BQ31 491 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 TMEM204Q9BSN7 226 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 TMED9Q9BVK6 235 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 REPIN1Q9BWE0 567 aaKnown RBP18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 BCL2L14Q9BZR8 327 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 SP140LQ9H930 580 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 NDUFB11Q9NX14 153 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 PTTG3PQ9NZH4 202 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 ZNF281Q9Y2X9 895 aa18.75■□□□□ 0.59
PDLIM3-203ENST00000284771 ATE1O95260 518 aa18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 CD3EP07766 207 aa18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 FAM3AP98173 230 aa18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 BLMHQ13867 455 aa18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 DAZAP2Q15038 168 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 SP5Q6BEB4 398 aaPredicted RBP18.74■□□□□ 0.59
PDLIM3-203ENST00000284771 ZNF704Q6ZNC4 412 aaPredicted RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms