RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 GPR173Q9NS66 373 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CCSO14618 274 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ZP3P21754 424 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 CTBSQ01459 385 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 RTP2Q5QGT7 225 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 DGAT2L7PQ6IED9 249 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF778Q96MU6 729 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ATG101Q9BSB4 218 aa7.97□□□□□ -1.13
NIPBL-201ENST00000282516 ZNF768Q9H5H4 540 aaKnown RBP7.97□□□□□ -1.13
NIPBL-201ENST00000282516 NCOR1O75376 2440 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 H3BNC9 293 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 EIF4E2O60573 245 aaKnown RBP7.96□□□□□ -1.13
NIPBL-201ENST00000282516 CD200P41217 278 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 NOVA1P51513 510 aaKnown RBP7.96□□□□□ -1.13
NIPBL-201ENST00000282516 LINC00696Q6ZRV3 163 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 TMEM255BQ8WV15 326 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 M0QZQ0 153 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 ARSAP15289 507 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 CTSCP53634 463 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 MYPOPQ86VE0 399 aaPredicted RBP7.96□□□□□ -1.13
NIPBL-201ENST00000282516 OR5V1Q9UGF6 321 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 XRCC2O43543 280 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 NPY5RQ15761 445 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 PRTGQ2VWP7 1150 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 Q56UQ5 140 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 VASH2Q86V25 355 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 BADQ92934 168 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 SIRT3Q9NTG7 399 aaPredicted RBP7.96□□□□□ -1.13
NIPBL-201ENST00000282516 NAGKQ9UJ70 344 aa7.96□□□□□ -1.13
NIPBL-201ENST00000282516 SNRPGP15A8MWD9 76 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 PIPP12273 146 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-201ENST00000282516 STUMQ69YW2 141 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 ACOT8O14734 319 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 FURINP09958 794 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 OR3A1P47881 315 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 PIGPP57054 158 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 ETFDHQ16134 617 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 PRRG2O14669 202 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 TGFBR1P36897 503 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 MAT1AQ00266 395 aaKnown RBP7.96□□□□□ -1.14
NIPBL-201ENST00000282516 LYG2Q86SG7 212 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 MS4A10Q96PG2 267 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.96□□□□□ -1.14
NIPBL-201ENST00000282516 M0R1X1 148 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 RBPMS2Q6ZRY4 209 aaKnown RBP7.96□□□□□ -1.14
NIPBL-201ENST00000282516 DHRS4Q9BTZ2 278 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 IL5P05113 134 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 OR2B11Q5JQS5 317 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 PIANPQ8IYJ0 282 aa7.96□□□□□ -1.14
NIPBL-201ENST00000282516 NEURL1O76050 574 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SP1P08047 785 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 G6PCP35575 357 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 CLN3Q13286 438 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ARRDC2Q8TBH0 407 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 LKAAEAR1Q8TD35 194 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 GALMQ96C23 342 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 PDLIM5Q96HC4 596 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 CHST8Q9H2A9 424 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 A0A1B0GVG6 124 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 FIGNL2A6NMB9 653 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 UQCRFS1P47985 274 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 MRPS21P82921 87 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 Q8IYB0 196 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SLC35B4Q969S0 331 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 C2orf50Q96LR7 162 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 A0A087WV62 115 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 M0R1B8 84 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 FZD6O60353 706 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 CRYBA1P05813 215 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 GABRB1P18505 474 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 KCNJ3P48549 501 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF429Q86V71 674 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 LINC00597Q9H2U6 94 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 UBE2ZQ9H832 354 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SLC45A2Q9UMX9 530 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 LSM2Q9Y333 95 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 N4BP2Q86UW6 1770 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TMEM127O75204 238 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ALOX12BO75342 701 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 APEHP13798 732 aaKnown RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 CDC34P49427 236 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 PRSS3P2Q8NHM4 247 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 PELI1Q96FA3 418 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 CTSFQ9UBX1 484 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 C5orf49A4QMS7 147 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 M0R135 149 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SNAI1O95863 264 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 NID1P14543 1247 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 SOX4Q06945 474 aaPredicted RBP7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ATP6V1FQ16864 119 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 PNLIPRP3Q17RR3 467 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 Q6ZN92 141 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 KIAA1958Q8N8K9 716 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF511Q8NB15 262 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TTC9Q92623 222 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 ZNF799Q96GE5 643 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 WASHC3Q9Y3C0 194 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TIMP1P01033 207 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 TFAP2AP05549 437 aa7.95□□□□□ -1.14
NIPBL-201ENST00000282516 FGF2P09038 288 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms