RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 ZNF239Q16600 458 aaKnown RBP15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF774Q6NX45 483 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 OR56B4Q8NH76 319 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 TMEM54Q969K7 222 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 PNPLA2Q96AD5 504 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 FAM173AQ9BQD7 235 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ING3Q9NXR8 418 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 A0A1W2PP11 408 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 CXCL3P19876 107 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 FSTP19883 344 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ANXA7P20073 488 aaKnown RBP15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF93P35789 620 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-201ENST00000279247 AP3S2P59780 193 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 CEACAM16Q2WEN9 425 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 HACD4Q5VWC8 232 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 FAM166AQ6J272 317 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF813Q6ZN06 617 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ADGRE4PQ86SQ3 457 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 NOXA1Q86UR1 476 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 SEC22CQ9BRL7 303 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 TTTY12Q9BZ98 90 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 OR51J1Q9H342 316 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 CALHM2Q9HA72 323 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 MEGF11A6BM72 1044 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 HPXP02790 462 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 NR2C1P13056 603 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 DYRK1AQ13627 763 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ST3GAL2Q16842 350 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF782Q6ZMW2 699 aaPredicted RBP15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ASCL5Q7RTU5 278 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 ADAMTS17Q8TE56 1095 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 SORCS2Q96PQ0 1159 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 BANF2Q9H503 90 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 EXO5Q9H790 373 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 CSAG2Q9Y5P2 127 aa15.78■□□□□ 0.12
CAPN1-201ENST00000279247 DSPP15924 2871 aaKnown RBP15.77■□□□□ 0.12
CAPN1-201ENST00000279247 LOC100509620A0A075B734 347 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 CIB4A0PJX0 185 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 ANKRD20A5PA0PJZ0 165 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 CD3DP04234 171 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 RLN1P04808 185 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 FAHP16930 419 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 PSMB1P20618 241 aaKnown RBP15.77■□□□□ 0.12
CAPN1-201ENST00000279247 UXS1Q8NBZ7 420 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 PRRG4Q9BZD6 226 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 DEFB127Q9H1M4 99 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF703Q9H7S9 590 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-201ENST00000279247 NIPAL2Q9H841 368 aa15.77■□□□□ 0.12
CAPN1-201ENST00000279247 FOXD3Q9UJU5 478 aaPredicted RBP15.77■□□□□ 0.12
CAPN1-201ENST00000279247 ZNF716A6NP11 495 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 M0QYG6 137 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 TERTO14746 1132 aaKnown RBP15.77■□□□□ 0.11
CAPN1-201ENST00000279247 SULT1B1O43704 296 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 ECDO95905 644 aaPredicted RBP15.77■□□□□ 0.11
CAPN1-201ENST00000279247 AIMP2Q13155 320 aaKnown RBP15.77■□□□□ 0.11
CAPN1-201ENST00000279247 C20orf196Q8IYI0 205 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 OR4C16Q8NGL9 310 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 FNDC9Q8TBE3 224 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 NTNG2Q96CW9 530 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 NOX3Q9HBY0 568 aa15.77■□□□□ 0.11
CAPN1-201ENST00000279247 M0R135 149 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 NKX2-8O15522 239 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 PLATP00750 562 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 OR3A4PP47883 348 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 ATMQ13315 3056 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 GSG1Q2KHT4 349 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 BTN2A1Q7KYR7 527 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 FGD2Q7Z6J4 655 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 GALNT16Q8N428 558 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 TMEM251Q8N6I4 163 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 OR11H7Q8NGC8 314 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 ZNF799Q96GE5 643 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 B4GALT7Q9UBV7 327 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 SPTBN4Q9H254 2564 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 A0A096LPE4 126 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 A0A1W2PPZ6 126 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 GSTT2BP0CG30 244 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 STOMP27105 288 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 RAD52P43351 418 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 GFRA1P56159 465 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 IFITM2Q01629 132 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 POU4F3Q15319 338 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 SNAI3Q3KNW1 292 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 CCDC92Q53HC0 331 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-201ENST00000279247 C10orf128Q5T292 105 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 OR4S1Q8NGB4 309 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 ELL3Q9HB65 397 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-201ENST00000279247 LSM6P62312 80 aaKnown RBP15.76■□□□□ 0.11
CAPN1-201ENST00000279247 BTG1P62324 171 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 GRB2P62993 217 aaKnown RBP15.76■□□□□ 0.11
CAPN1-201ENST00000279247 ELFN2Q5R3F8 820 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.76■□□□□ 0.11
CAPN1-201ENST00000279247 SLC7A5P1Q8MH63 180 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 OR51S1Q8NGJ8 323 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 FGFBP3Q8TAT2 258 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 SCMH1Q96GD3 660 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 ADGRG7Q96K78 797 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 LYZL4Q96KX0 146 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 NICN1Q9BSH3 213 aa15.76■□□□□ 0.11
CAPN1-201ENST00000279247 CHIAQ9BZP6 476 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms