RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 OR2AE1Q8NHA4 323 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 Q8TCH9 128 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 GNPDA2Q8TDQ7 276 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 NSMCE2Q96MF7 247 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 PCGF1Q9BSM1 259 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 MYLK2Q9H1R3 596 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 GORASP2Q9H8Y8 452 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 FN3KRPQ9HA64 309 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 PNRC2Q9NPJ4 139 aaKnown RBP10.64□□□□□ -0.71
CD44-203ENST00000278386 MED4Q9NPJ6 270 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 MRPL22Q9NWU5 206 aaKnown RBP10.64□□□□□ -0.71
CD44-203ENST00000278386 KIF17Q9P2E2 1029 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 KCNG2Q9UJ96 466 aa10.64□□□□□ -0.71
CD44-203ENST00000278386 KIR2DS1A0A191URI9 304 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 A0A1B0GWJ7 208 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 TVP23AA6NH52 213 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 A6NLC8 198 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 C22orf46C9J442 243 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 C3orf80F5H4A9 247 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 ARPC2O15144 300 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 IDH3BO43837 385 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 FSTL3O95633 263 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 MDKP21741 143 aaPredicted RBP10.63□□□□□ -0.71
CD44-203ENST00000278386 GSSP48637 474 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 HOXA4Q00056 320 aaPredicted RBP10.63□□□□□ -0.71
CD44-203ENST00000278386 TSPAN31Q12999 210 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 DEFB112Q30KQ8 113 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 SNAI3Q3KNW1 292 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 RUSC1-AS1Q66K80 236 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 SFRP4Q6FHJ7 346 aaPredicted RBP10.63□□□□□ -0.71
CD44-203ENST00000278386 C16orf87Q6PH81 154 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 CYB561A3Q8NBI2 242 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 DACT3Q96B18 629 aaPredicted RBP10.63□□□□□ -0.71
CD44-203ENST00000278386 TMIGD2Q96BF3 282 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 MAP6Q96JE9 813 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 COPS4Q9BT78 406 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 SLC22A4Q9H015 551 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 EGLN3Q9H6Z9 239 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 MARCH7Q9H992 704 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 ERVK-18Q9QC07 812 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 RNF7Q9UBF6 113 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 CDH10Q9Y6N8 788 aa10.63□□□□□ -0.71
CD44-203ENST00000278386 hCG_1807616A0A1W2PRN6 198 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 CD300LBA8K4G0 201 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 KCNAB3O43448 404 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 ADAM20O43506 726 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 SPARCP09486 303 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 MSX2P35548 267 aaPredicted RBP10.62□□□□□ -0.71
CD44-203ENST00000278386 NPY4RP50391 375 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 ZNF92Q03936 586 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 TAF13Q15543 124 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 SAMD4BQ5PRF9 694 aaKnown RBP10.62□□□□□ -0.71
CD44-203ENST00000278386 RPL13AP3Q6NVV1 102 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 PGBD2Q6P3X8 592 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 LYPD4Q6UWN0 246 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 ZDHHC21Q8IVQ6 265 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 OR9Q2Q8NGE9 314 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 OR51L1Q8NGJ5 315 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 OR9Q1Q8NGQ5 310 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 OR2T4Q8NH00 348 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 TBC1D23Q9NUY8 699 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 CTSZQ9UBR2 303 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 N6AMT1Q9Y5N5 214 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 COMMD3-BMI1R4GMX3 469 aa10.62□□□□□ -0.71
CD44-203ENST00000278386 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.61□□□□□ -0.71
CD44-203ENST00000278386 POM121CA8CG34 1229 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 SRRM5B3KS81 715 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 LGALS8O00214 317 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 GMDSO60547 372 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 TOX4O94842 621 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 CRYBA1P05813 215 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 GRPP07492 148 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 SFTPBP07988 381 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 HSD17B1P14061 328 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 CFHR2P36980 270 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 PSMB10P40306 273 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 PRKXP51817 358 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 MXRA7P84157 204 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 GLYATL3Q5SZD4 288 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 METTL11BQ5VVY1 283 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 CD276Q5ZPR3 534 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 FIP1L1Q6UN15 594 aaKnown RBP10.61□□□□□ -0.71
CD44-203ENST00000278386 TREML4Q6UXN2 200 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 ZNF841Q6ZN19 808 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 DCXRQ7Z4W1 244 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 PGAM4Q8N0Y7 254 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 OR56B2PQ8NGI1 322 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 IL1RAPQ9NPH3 570 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 TRIM36Q9NQ86 728 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 C1orf123Q9NWV4 160 aa10.61□□□□□ -0.71
CD44-203ENST00000278386 TRAV38-1A0A0B4J264 116 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 FAM181BA6NEQ2 426 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 OOEPA6NGQ2 149 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 ZNF879B4DU55 563 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 TNFRSF11BO00300 401 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 P2RY10O00398 339 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 BHLHE40O14503 412 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 TBX1O43435 398 aa10.6□□□□□ -0.71
CD44-203ENST00000278386 KNG1P01042 644 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms