RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 BDKRB2P30411 391 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 GLYATL3Q5SZD4 288 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 CCBE1Q6UXH8 406 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 NRARPQ7Z6K4 114 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 OR52H1Q8NGJ2 320 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 OR6M1Q8NGM8 313 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 FOXRED1Q96CU9 486 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 S100A16Q96FQ6 103 aaKnown RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 THAP7Q9BT49 309 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 C11orf54Q9H0W9 315 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 TMEM138Q9NPI0 162 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 GLRX2Q9NS18 164 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 RHBDD3Q9Y3P4 386 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 APC2O95996 2303 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 FUOMA2VDF0 154 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 ABOP16442 354 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 ZNF20P17024 532 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 HTR2CP28335 458 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 POU3F4P49335 361 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 FAPQ12884 760 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 SFRP5Q5T4F7 317 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 SPACA3Q8IXA5 215 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 CGGBP1Q9UFW8 167 aaPredicted RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 ATPIF1Q9UII2 106 aa19.28■□□□□ 0.68
CCDC7-201ENST00000277657 SPENQ96T58 3664 aaKnown RBP19.28■□□□□ 0.68
CCDC7-201ENST00000277657 MED12LQ86YW9 2145 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 LOC100289279A0A1B0GTE1 492 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 LINC00854A0A1B0GVQ3 168 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 HTR5AP47898 357 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 BCAP31P51572 246 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 HGFACQ04756 655 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 PLA2G7Q13093 441 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 GFOD2Q3B7J2 385 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 C2orf76Q3KRA6 126 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 PGAP1Q75T13 922 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 UBE2J2Q8N2K1 259 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 RBMXL3Q8N7X1 1067 aaKnown RBP19.27■□□□□ 0.68
CCDC7-201ENST00000277657 CCDC54Q8NEL0 328 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 RFT1Q96AA3 541 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 OR10A2Q9H208 303 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 PRSS50Q9UI38 385 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 V9GYS6 101 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 MGAQ8IWI9 3026 aa19.27■□□□□ 0.68
CCDC7-201ENST00000277657 LANCL1O43813 399 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 PFDN1O60925 122 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 RAB3AP20336 220 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 HOXD11P31277 338 aaPredicted RBP19.26■□□□□ 0.67
CCDC7-201ENST00000277657 MNDAP41218 407 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 OR3A2P47893 321 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 SNAI3Q3KNW1 292 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 SLC36A2Q495M3 483 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 C9orf135Q5VTT2 229 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 P4HA3Q7Z4N8 544 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 SLC22A4Q9H015 551 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 MRPS7Q9Y2R9 242 aaKnown RBP19.26■□□□□ 0.67
CCDC7-201ENST00000277657 K7EM74 188 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 GSTZ1O43708 216 aaPredicted RBP19.26■□□□□ 0.67
CCDC7-201ENST00000277657 DHRS3O75911 302 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 TPPPO94811 219 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 GUSBP1Q15486 140 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 PABPC1L2AQ5JQF8 200 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 HACD4Q5VWC8 232 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 FBXW9Q5XUX1 488 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 RPUSD3Q6P087 351 aaKnown RBP19.26■□□□□ 0.67
CCDC7-201ENST00000277657 IZUMO1Q8IYV9 350 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 JAGN1Q8N5M9 183 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 OR13C9Q8NGT0 318 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 ZFP3Q96NJ6 502 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 NKX3-1Q99801 234 aaPredicted RBP19.26■□□□□ 0.67
CCDC7-201ENST00000277657 C12orf49Q9H741 205 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 CEP295Q9C0D2 2601 aa19.26■□□□□ 0.67
CCDC7-201ENST00000277657 EEF1E1O43324 174 aaKnown RBP19.25■□□□□ 0.67
CCDC7-201ENST00000277657 SULT1B1O43704 296 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 ERCC1P07992 297 aaPredicted RBP19.25■□□□□ 0.67
CCDC7-201ENST00000277657 CDK2P24941 298 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 PTH2RP49190 550 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 ANKRD16Q6P6B7 361 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 FGD2Q7Z6J4 655 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 OR5AS1Q8N127 324 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 OR52N4Q8NGI2 321 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 YIPF5Q969M3 257 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 SGK3Q96BR1 496 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 SORCS2Q96PQ0 1159 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 TRIB1Q96RU8 372 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 UQCC2Q9BRT2 126 aa19.25■□□□□ 0.67
CCDC7-201ENST00000277657 METTL17Q9H7H0 456 aaPredicted RBP19.25■□□□□ 0.67
CCDC7-201ENST00000277657 A0A096LPE4 126 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 A0A1W2PPZ6 126 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 ZNHIT1O43257 154 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 EFNB2P52799 333 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 CPEB3Q8NE35 698 aaKnown RBP19.24■□□□□ 0.67
CCDC7-201ENST00000277657 NEDD4LQ96PU5 975 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 PLEKHA1Q9HB21 404 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 DMXL2Q8TDJ6 3036 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 ANKRD11Q6UB99 2663 aaPredicted RBP19.24■□□□□ 0.67
CCDC7-201ENST00000277657 TMEM272A0A1B0GTI8 110 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 OR14I1A6ND48 311 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 MKRN2OSH3BPM6 223 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 LDLRAD4O15165 306 aa19.24■□□□□ 0.67
CCDC7-201ENST00000277657 IL18BPO95998 194 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms