RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 RAB6AP20340 208 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 PRSS3P35030 304 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ECH1Q13011 328 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SRSF6Q13247 344 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 RAB35Q15286 201 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF766Q5HY98 468 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SFRP4Q6FHJ7 346 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 OR10K2Q6IF99 312 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 Q6ZSR3 168 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ADGRE4PQ86SQ3 457 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 CDH26Q8IXH8 852 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 OR5AS1Q8N127 324 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SPTSSAQ969W0 71 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SCMH1Q96GD3 660 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 FOXB1Q99853 325 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 METTL17Q9H7H0 456 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 NUDT15Q9NV35 164 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 MYEF2Q9P2K5 600 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 MTFP1Q9UDX5 166 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 POU2F3Q9UKI9 436 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 NOSIPQ9Y314 301 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 NCOA6Q14686 2063 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 A0A0A6YYH2 397 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 A0A0A6YYJ9 748 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 A6NJ64 397 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 M0R135 149 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SGCEO43556 437 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SYNGR3O43761 229 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 MRPL33O75394 65 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ACTL6AO96019 429 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ALDOBP05062 364 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 H2AFB2P0C5Z0 115 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 CRYGSP22914 178 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 SLC6A9P48067 706 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 RAG2P55895 527 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ARG2P78540 354 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 QRFPP83859 136 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 KCNJ8Q15842 424 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 TMEM255AQ5JRV8 349 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 TSPO2Q5TGU0 170 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 OLFML2AQ68BL7 652 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 PAQR4Q8N4S7 273 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 OR1F12Q8NHA8 337 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF799Q96GE5 643 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 ALKBH3Q96Q83 286 aaPredicted RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 LINC00470Q9BZP3 86 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 RNF122Q9H9V4 155 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 NEK6Q9HC98 313 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 PARPBPQ9NWS1 579 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 MCTS1Q9ULC4 181 aaKnown RBP8.41□□□□□ -1.06
TRIM55-201ENST00000276573 TIMM10BQ9Y5J6 103 aa8.41□□□□□ -1.06
TRIM55-201ENST00000276573 OTOGLQ3ZCN5 2332 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 CACNA1HO95180 2353 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 C7orf66A4D0T2 115 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SULT1C2O00338 296 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 TM4SF5O14894 197 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 BPNT1O95861 308 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 PATE4P0C8F1 98 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 B4GALT1P15291 398 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF32P17041 273 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 PSMB1P20618 241 aaKnown RBP8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF93P35789 620 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-201ENST00000276573 NBL1P41271 181 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 CCL11P51671 97 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 RRAS2P62070 204 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-201ENST00000276573 GUCA2AQ02747 115 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SCRN3Q0VDG4 424 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 CBX3Q13185 183 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 GFOD2Q3B7J2 385 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF774Q6NX45 483 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 DRAM2Q6UX65 266 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 PLXDC2Q6UX71 529 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ZNF627Q7L945 461 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 RNF144BQ7Z419 303 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ANGPTL5Q86XS5 388 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SKA3Q8IX90 412 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 TUSC5Q8IXB3 177 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 FAM109AQ8N4B1 249 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 CCDC54Q8NEL0 328 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 GPX8Q8TED1 209 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 DEDD2Q8WXF8 326 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SGK3Q96BR1 496 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 PRRX2Q99811 253 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 PRRG4Q9BZD6 226 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 ACTR6Q9GZN1 396 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 DEFB127Q9H1M4 99 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SLCO5A1Q9H2Y9 848 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 GHITMQ9H3K2 345 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 RANGRFQ9HD47 186 aaPredicted RBP8.4□□□□□ -1.06
TRIM55-201ENST00000276573 SLC7A10Q9NS82 523 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 TAS2R8Q9NYW2 309 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 EMC3Q9P0I2 261 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 FBLN5Q9UBX5 448 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 V9GYS6 101 aa8.4□□□□□ -1.06
TRIM55-201ENST00000276573 IGKV1-9A0A0C4DH69 117 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 METTL21EPA6NDL7 271 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 OR6C6A6NF89 314 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 ZNF724A8MTY0 619 aa8.39□□□□□ -1.07
TRIM55-201ENST00000276573 VSIG8P0DPA2 414 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms