RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OR5H8P0DN80 308 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 EVX1P49640 407 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 MNX1P50219 401 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 RAB13P51153 203 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 RPS23P62266 143 aaKnown RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 GUCA2AQ02747 115 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 HMGN3Q15651 99 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 WIPI1Q5MNZ9 446 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 LHFPL2Q6ZUX7 228 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 PRSS41Q7RTY9 318 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 CISD2Q8N5K1 135 aaKnown RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 BPIFCQ8NFQ6 507 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 TMEM9BQ9NQ34 198 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 AHDC1Q5TGY3 1603 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 OR5H14A6NHG9 310 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 SLC22A20A6NK97 555 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 LMO7DNF2Z398 122 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 H3BMH7 237 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 LRP3O75074 770 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 GPANK1O95872 356 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 SELEP16581 610 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 RAC1P63000 192 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 ZNF85Q03923 595 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 NKG7Q16617 165 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 ZNF573Q86YE8 665 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 TRMT61AQ96FX7 289 aaKnown RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 SLC35E1Q96K37 410 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 LINC00615Q96LM1 132 aaPredicted RBP10.36□□□□□ -0.75
USP53-201ENST00000274030 PLA2G2FQ9BZM2 168 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 MOB1AQ9H8S9 216 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 SCPEP1Q9HB40 452 aa10.36□□□□□ -0.75
USP53-201ENST00000274030 XRCC2O43543 280 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 PRPH2P23942 346 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 UBE2G2P60604 165 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 MYBPHQ13203 477 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 SYS1Q8N2H4 156 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 GNRHR2Q96P88 292 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 MN1Q10571 1320 aaPredicted RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 COL16A1Q07092 1604 aaPredicted RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 PEX11BO96011 259 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 PTHLHP12272 177 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 FOXB2Q5VYV0 432 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 ZDHHC23Q8IYP9 409 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 C2CD4CQ8TF44 421 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 GSX2Q9BZM3 304 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 V9GYS6 101 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 A0A087WZY1 265 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 H3BP45 60 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 PIAS2O75928 621 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 F2RP25116 425 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 RPS16P62249 146 aaKnown RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 UBE2G1P62253 170 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 FAHD1Q6P587 224 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 C16orf47Q6ZP98 133 aaPredicted RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 LSRQ86X29 649 aaPredicted RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 EXD3Q8N9H8 876 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 TXN2Q99757 166 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 SLC25A19Q9HC21 320 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 ARPC3O15145 178 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 MT-ND4LP03901 98 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 GIPP09681 153 aaPredicted RBP10.35□□□□□ -0.75
USP53-201ENST00000274030 CTXN2P0C2S0 81 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 MGMTP16455 207 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 BAK1Q16611 211 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 GUSBP11Q6P575 273 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 OR4Q3Q8NH05 313 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 ZNF416Q9BWM5 594 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 SCN9AQ15858 1988 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 A0A087WUJ7 227 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 PMS2P1A4D2B8 440 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 C1QBP02746 253 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 PSMB6P28072 239 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 DEFA6Q01524 100 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 AQP6Q13520 282 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 ZNF793Q6ZN11 406 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 CDC20BQ86Y33 519 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 MFSD4AQ8N468 514 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 OR4S1Q8NGB4 309 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 OR4C3Q8NH37 302 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 LRFN5Q96NI6 719 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 SHROOM3Q8TF72 1996 aa10.35□□□□□ -0.75
USP53-201ENST00000274030 OR4E1P0C645 316 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 SUB1P53999 127 aaKnown RBP eCLIP10.34□□□□□ -0.75
USP53-201ENST00000274030 PIGPP57054 158 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 UBE2IP63279 158 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 HYAL1Q12794 435 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 FOXC1Q12948 553 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 FAM74A1Q5RGS3 127 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 DHRS13Q6UX07 377 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 C17orf107Q6ZR85 190 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 OR2AK2Q8NG84 335 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 DDX60Q8IY21 1712 aaKnown RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 LRP5LA4QPB2 252 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 FIGNL2A6NMB9 653 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 DCTN6O00399 190 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 AKR7A2O43488 359 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 CBR3O75828 277 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 SULT1C4O75897 302 aa10.34□□□□□ -0.75
USP53-201ENST00000274030 HOXB3P14651 431 aaPredicted RBP10.34□□□□□ -0.75
USP53-201ENST00000274030 GPM6AP51674 278 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms