RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 MT-CO2P00403 227 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 FTH1P19P0C7X4 201 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 CCR9P51686 369 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 USF2Q15853 346 aaPredicted RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 C2orf76Q3KRA6 126 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SFRP5Q5T4F7 317 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 FJX1Q86VR8 437 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 OR51S1Q8NGJ8 323 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 FBXO17Q96EF6 278 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 TSNAXQ99598 290 aaKnown RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 UGT2A1Q9Y4X1 527 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 A0A1W2PPH5 198 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 PRICKLE3O43900 615 aaPredicted RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 CDKN2AP42771 156 aaKnown RBP12.3□□□□□ -0.44
NPC1-201ENST00000269228 ZNF546Q86UE3 836 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 PRSS35Q8N3Z0 413 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 MCHR2Q969V1 340 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 PBDC1Q9BVG4 233 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 SLC25A31Q9H0C2 315 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 FLRT3Q9NZU0 649 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 DTX4Q9Y2E6 619 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 PRELID3BQ9Y3B1 194 aa12.3□□□□□ -0.44
NPC1-201ENST00000269228 B4E171 279 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 PLPP3O14495 311 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 HSD17B6O14756 317 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 CT45A8P0DMV1 189 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 CT45A9P0DMV2 189 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 TSPAN7P41732 249 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 MAGEA5P43359 124 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ZNF83P51522 516 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ZNF136P52737 540 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ACSM1Q08AH1 577 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 CT45A2Q5DJT8 189 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 OR10J5Q8NHC4 309 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 HES1Q14469 280 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 RHEBQ15382 184 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 BCL2A1Q16548 175 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 TFAP2EQ6VUC0 442 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 C9orf40Q8IXQ3 194 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 C10orf111Q8N326 155 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 MEIKINA0A087WXM9 373 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 TRBV5-3A0A0A0MS03 114 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ZNF816-ZNF321PA0A0X1KG74 233 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 FAM90A27PA6NNH2 459 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 HEXAP06865 529 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 OMGP23515 440 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 SSTR2P30874 369 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 OPRM1P35372 400 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 GK2Q14410 553 aaPredicted RBP12.29□□□□□ -0.44
NPC1-201ENST00000269228 C3AR1Q16581 482 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ZNF468Q5VIY5 522 aaPredicted RBP12.29□□□□□ -0.44
NPC1-201ENST00000269228 RNLSQ5VYX0 342 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 CRIPAKQ8N1N5 446 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 FBXO8Q9NRD0 319 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 ASF1BQ9NVP2 202 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 A0A1W2PQD3 144 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 APOC3P02656 99 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 RAP2BP61225 183 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 HEPHL1Q6MZM0 1159 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 C1orf87Q8N0U7 546 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 OR4D11Q8NGI4 311 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 C12orf10Q9HB07 376 aa12.29□□□□□ -0.44
NPC1-201ENST00000269228 GABARAPH6UMI1 98 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 LYZL6O75951 148 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 NFYAP23511 347 aaPredicted RBP12.28□□□□□ -0.44
NPC1-201ENST00000269228 IL3RAP26951 378 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CD82P27701 267 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 DGCR2P98153 550 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CES1P1Q9UKY3 287 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 AGPAT2O15120 278 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CYB5BO43169 146 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 NTN1O95631 604 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 HLA-HP01893 362 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 ZNF32P17041 273 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 RAB35Q15286 201 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 KCNJ8Q15842 424 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 OR4A16Q8NH70 328 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 SPTBP11277 2137 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 ABCA7Q8IZY2 2146 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 SHOXO15266 292 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CSF3P09919 207 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 ZNF774Q6NX45 483 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 DPPA2Q7Z7J5 298 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CELF2-AS1Q8N7Q2 184 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 OR51H1Q8NH63 302 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 NUDCD2Q8WVJ2 157 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 S100PBPQ96BU1 408 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 UBL7Q96S82 380 aaPredicted RBP12.28□□□□□ -0.44
NPC1-201ENST00000269228 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 TMEM100Q9NV29 134 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 PILRAQ9UKJ1 303 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 CTLA4P16410 223 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 ALOX5APP20292 161 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 RAC3P60763 192 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 UPRTQ96BW1 309 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 MSI2Q96DH6 328 aaKnown RBP12.28□□□□□ -0.44
NPC1-201ENST00000269228 FCRL1Q96LA6 429 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 RANGRFQ9HD47 186 aaPredicted RBP12.28□□□□□ -0.44
NPC1-201ENST00000269228 GCM1Q9NP62 436 aa12.28□□□□□ -0.44
NPC1-201ENST00000269228 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms