RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 ZNF273Q14593 569 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 SLC22A6Q4U2R8 563 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 RHBDD2Q6NTF9 364 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 WDR74Q6RFH5 385 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 SHISA6Q6ZSJ9 500 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 RNF144BQ7Z419 303 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 TRAPPC6BQ86SZ2 158 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 RTN4RL2Q86UN3 420 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 SLC25A45Q8N413 288 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 SLC22A24Q8N4F4 322 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 GVQW1Q8N7I0 195 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 SUMF1Q8NBK3 374 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 RELL2Q8NC24 303 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 ST8SIA4Q92187 359 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 ZC3H10Q96K80 434 aaKnown RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 WDR77Q9BQA1 342 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 MS4A7Q9GZW8 240 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 ZNF768Q9H5H4 540 aaKnown RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 LDAHQ9H6V9 325 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 CENPMQ9NSP4 180 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 GPN3Q9UHW5 284 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 FARSAQ9Y285 508 aaKnown RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 SLC5A6Q9Y289 635 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 PTPRZ1P23471 2315 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 DBX1A6NMT0 343 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 OR2AT4A6NND4 320 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 GLB1P16278 677 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 FOXK1P85037 733 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 NHLH1Q02575 133 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 NKPD1Q17RQ9 610 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 RNASE10Q5GAN6 216 aaKnown RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 C3orf33Q6P1S2 294 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 TMPRSS9Q7Z410 1059 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 OR5AS1Q8N127 324 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
BEST3-201ENST00000266661 ADPRHL1Q8NDY3 354 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 PXT1Q8NFP0 134 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 DDIT4LQ96D03 193 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 B3GNT4Q9C0J1 378 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 ARRDC1-AS1Q9H2J1 176 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 KCNK7Q9Y2U2 307 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 LHFPL6Q9Y693 200 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 FAM186AA6NE01 2351 aa11.04□□□□□ -0.64
BEST3-201ENST00000266661 A0A0A6YYD4 124 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 CEACAM18A8MTB9 384 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 SULT2B1O00204 365 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 BCL2L11O43521 198 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 HLA-AP01891 365 aaKnown RBP11.03□□□□□ -0.64
BEST3-201ENST00000266661 TBPP20226 339 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 LAP3P28838 519 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 CASRP41180 1078 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 CSNK1EP49674 416 aaKnown RBP11.03□□□□□ -0.64
BEST3-201ENST00000266661 BIDP55957 195 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 BTN1A1Q13410 526 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 ZNF239Q16600 458 aaKnown RBP11.03□□□□□ -0.64
BEST3-201ENST00000266661 SCGB2B2Q4G0G5 96 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 OR52W1Q6IF63 320 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 TCEAL6Q6IPX3 200 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 CFAP77Q6ZQR2 320 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 RHOUQ7L0Q8 258 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 CD163Q86VB7 1156 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.03□□□□□ -0.64
BEST3-201ENST00000266661 SLC38A9Q8NBW4 561 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 OR52H1Q8NGJ2 320 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 SSC4DQ8WTU2 575 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 NUDCD2Q8WVJ2 157 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 TCEAL3Q969E4 200 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 EMC6Q9BV81 110 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 LPAR5Q9H1C0 372 aa11.03□□□□□ -0.64
BEST3-201ENST00000266661 RPH3AQ9Y2J0 694 aaPredicted RBP11.03□□□□□ -0.64
BEST3-201ENST00000266661 SHISA8B8ZZ34 492 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 TEX46H3BTG2 121 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 EIF1AYO14602 144 aaKnown RBP11.02□□□□□ -0.64
BEST3-201ENST00000266661 CCSO14618 274 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 SYT7O43581 403 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 SCGNO76038 276 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 STK17BO94768 372 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 DKK1O94907 266 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PGA4P0DJD7 388 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PGA3P0DJD8 388 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 MYF5P13349 255 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 ZNF17P17021 662 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 ANOS1P23352 680 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 ATP1B3P54709 279 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PLPPR5Q32ZL2 321 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 THEM4Q5T1C6 240 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 SLC25A47Q6Q0C1 308 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 ACOT7LQ6ZUV0 252 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 HOGA1Q86XE5 327 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 ADAD2Q8NCV1 583 aaKnown RBP11.02□□□□□ -0.64
BEST3-201ENST00000266661 OR10R2Q8NGX6 335 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PPP1R1CQ8WVI7 109 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PHYHIPLQ96FC7 376 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 MRGPRX4Q96LA9 322 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PRRX2Q99811 253 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 NUDT22Q9BRQ3 303 aa11.02□□□□□ -0.64
BEST3-201ENST00000266661 PNRC2Q9NPJ4 139 aaKnown RBP11.02□□□□□ -0.64
BEST3-201ENST00000266661 NOP16Q9Y3C1 178 aaKnown RBP11.02□□□□□ -0.64
BEST3-201ENST00000266661 TRBV6-7A0A0A0MS04 114 aa11.02□□□□□ -0.65
BEST3-201ENST00000266661 TPD52L2O43399 206 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms