RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 GPX7Q96SL4 187 aaPredicted RBP12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 MRPS18AQ9NVS2 196 aaKnown RBP12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 TBC1D24Q9ULP9 559 aa12.83□□□□□ -0.35
PDLIM2-201ENST00000265810 AQP8O94778 261 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 UBBP0CG47 229 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 NR4A2P43354 598 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 DMKNQ6E0U4 476 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 ASCC1Q8N9N2 400 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 SLC26A10Q8NG04 563 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 DOK1Q99704 481 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 RYDENQ9NUL5 291 aaKnown RBP12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 PTPRSQ13332 1948 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 TOXO94900 526 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 NXPH2O95156 264 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 GNRHRP30968 328 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 S100A10P60903 97 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 BPIFB2Q8N4F0 458 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 SLC39A7Q92504 469 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 MGAT4CQ9UBM8 478 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 ATXN7L3Q14CW9 347 aaPredicted RBP12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 RNLSQ5VYX0 342 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 LAIR2Q6ISS4 152 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 OR8H1Q8NGG4 311 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 OR51F2Q8NH61 342 aa12.83□□□□□ -0.36
PDLIM2-201ENST00000265810 FUOMA2VDF0 154 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 ZNF780AO75290 641 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 TGM1P22735 817 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 CDK2P24941 298 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 EVX1P49640 407 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 CCR9P51686 369 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 PRSS12P56730 875 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 TNK1Q13470 666 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 APOBEC3DQ96AK3 386 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 UFSP2Q9NUQ7 469 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 RALGAPA1Q6GYQ0 2036 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 MCRIP1C9JLW8 97 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 ZNF354AO60765 605 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 UPK3AO75631 287 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 TXNDC12O95881 172 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 EIF4EP06730 217 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 TMIGD3P0DMS9 266 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 LSM6P62312 80 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 LYSMD2Q8IV50 215 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 CMTM4Q8IZR5 234 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 FBLIM1Q8WUP2 373 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 C7orf50Q9BRJ6 194 aaKnown RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 FRRS1LQ9P0K9 344 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 UGT2A1Q9Y4X1 527 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 NUBP2Q9Y5Y2 271 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 SLC22A25Q6T423 547 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 SIAH3Q8IW03 269 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 RFLNBQ8N5W9 214 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 DVL3Q92997 716 aaPredicted RBP12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 SNX18Q96RF0 628 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 SCNM1Q9BWG6 230 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 FAIMQ9NVQ4 179 aa12.82□□□□□ -0.36
PDLIM2-201ENST00000265810 KLF4O43474 513 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 SULT1B1O43704 296 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 SLC34A2O95436 690 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 SFTPBP07988 381 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 GABRA1P14867 456 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 TSPO2Q5TGU0 170 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 HACD4Q5VWC8 232 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 BEST4Q8NFU0 473 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 OR1J1Q8NGS3 322 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 THAP6Q8TBB0 222 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 C11orf54Q9H0W9 315 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 NOX3Q9HBY0 568 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 ATF1P18846 271 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 MEF2DQ14814 521 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 OR8G1Q15617 311 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 ZNF441Q8N8Z8 693 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 OR6F1Q8NGZ6 308 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 PPP1R14BQ96C90 147 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 GPR35Q9HC97 309 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 EHFQ9NZC4 300 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 COL4A4P53420 1690 aaPredicted RBP12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 SNRNP200O75643 2136 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 CHRM2P08172 466 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 SRP9P49458 86 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 OR4K15Q8NH41 348 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 PRRT1Q99946 306 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 KLHDC2Q9Y2U9 406 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 ALPK3Q96L96 1907 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 OGG1O15527 345 aa12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 RBFOX1Q9NWB1 397 aaKnown RBP12.81□□□□□ -0.36
PDLIM2-201ENST00000265810 A0A0G2JMM0 328 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 A0A1W2PPB8 328 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 A0A1W2PRS3 328 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 TRIM64CA6NLI5 447 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 KIR3DP1A8MWS1 328 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 BPNT1O95861 308 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 UCNP55089 124 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 RTL6Q6ICC9 239 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 INO80EQ8NBZ0 244 aaPredicted RBP12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 PARD6AQ9NPB6 346 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 MEIOCA2RUB1 952 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 IGF2P01344 180 aa12.8□□□□□ -0.36
PDLIM2-201ENST00000265810 GALP22466 123 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms