RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 PGAM5Q96HS1 289 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ZNF385AQ96PM9 386 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 TBX15Q96SF7 602 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 RNF2Q99496 336 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 HIST1H2BNQ99877 126 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 HIST1H2BMQ99879 126 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ZNF2Q9BSG1 426 aaPredicted RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 VAMP8Q9BV40 100 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 SLC35B3Q9H1N7 401 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 RNF122Q9H9V4 155 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PITPNC1Q9UKF7 332 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 K7ERU9 68 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PIAS2O75928 621 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 IGLV3-27P01718 113 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 DBIP07108 87 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 RAB40ALP0C0E4 278 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 SNCAP37840 140 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 CSNK1DP48730 415 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 UCP3P55916 312 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 MLF1P58340 268 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 DCDP81605 110 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 ACSM1Q08AH1 577 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ZNF763Q0D2J5 394 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 NNATQ16517 81 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 CCSMST1Q4G0I0 132 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 RPL7L1Q6DKI1 246 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 AGTRAPQ6RW13 159 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 RNF44Q7L0R7 432 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ERASQ7Z444 233 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 BEND2Q8NDZ0 799 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 OR56B2PQ8NGI1 322 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 RAB40AQ8WXH6 277 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 EDAQ92838 391 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 NEIL2Q969S2 332 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 MOAP1Q96BY2 351 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 MS4A10Q96PG2 267 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 WWTR1Q9GZV5 400 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PCBD2Q9H0N5 130 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 SF3B6Q9Y3B4 125 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 IGLV3-10A0A075B6K4 115 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 CDHR4A6H8M9 788 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 TP53I11O14683 189 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ZNF217O75362 1048 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 NUDT14O95848 222 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ZNF20P17024 532 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 LPAR6P43657 344 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 TAS2R50P59544 299 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 MRPS21P82921 87 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 DHRS2Q13268 280 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 LASP1Q14847 261 aaKnown RBP7.57□□□□□ -1.2
LDB3-201ENST00000263066 KIAA0040Q15053 153 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 LDLRAD2Q5SZI1 272 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PRAMEF8Q5VWM4 474 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PRAMEF7Q5VXH5 474 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 HIST3H2BBQ8N257 126 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 OR8J2Q8NGG1 315 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 OR2D3Q8NGH3 330 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 OR51A7Q8NH64 312 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 METTL21AQ8WXB1 218 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 ALKBH4Q9NXW9 302 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 C5AR2Q9P296 337 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PRODH2Q9UF12 536 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 LAMP3Q9UQV4 416 aa7.57□□□□□ -1.2
LDB3-201ENST00000263066 PPP5D1E7EU14 171 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 NDUFS4O43181 175 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 ACRV1P26436 265 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 HNRNPA3P51991 378 aaKnown RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 OLIG3Q7RTU3 272 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 OR4N5Q8IXE1 308 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 NRMQ8IXM6 262 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 CMTM1Q8IZ96 169 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 OR4C15Q8NGM1 316 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 SFXN5Q8TD22 340 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 MCHR2Q969V1 340 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 ZMYND19Q96E35 227 aaPredicted RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 LYSMD1Q96S90 227 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 NUDT16L1Q9BRJ7 211 aaKnown RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 FGF20Q9NP95 211 aaPredicted RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 SIRT3Q9NTG7 399 aaPredicted RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 ZNF346Q9UL40 294 aaKnown RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 TMEM238C9JI98 176 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 XRCC3O43542 346 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 NSA2O95478 260 aaKnown RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 GPANK1O95872 356 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 IFNA21P01568 189 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 IGHA1P01876 353 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 F13BP05160 661 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 IRF2P14316 349 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 CTSSP25774 331 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 C12orf73Q69YU5 71 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 MRM1Q6IN84 353 aaKnown RBP7.56□□□□□ -1.2
LDB3-201ENST00000263066 ZNF774Q6NX45 483 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 SLC35D2Q76EJ3 337 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 SLC24A4Q8NFF2 622 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 GPR148Q8TDV2 347 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 PLA2G12AQ9BZM1 189 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 SEMA4GQ9NTN9 838 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 CACFD1Q9UGQ2 172 aa7.56□□□□□ -1.2
LDB3-201ENST00000263066 DIDO1Q9BTC0 2240 aaKnown RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms