RNA–Protein interactions for RNA: ENST00000261302.9

FOXN3-201, Transcript of forkhead box N3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene FOXN3, Length 2,542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-201ENST00000261302 MAPK8P45983 427 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 NCBP2P52298 156 aaKnown RBP eCLIP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 PAX5Q02548 391 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 TSTA3Q13630 321 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 RAB32Q13637 225 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 COA6Q5JTJ3 125 aaKnown RBP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 C1orf194Q5T5A4 169 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 NCR3LG1Q68D85 454 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 PTCRAQ6ISU1 281 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM220Q6QAJ8 160 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 OR56A1Q8NGH5 318 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 OR51A7Q8NH64 312 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 TAAR8Q969N4 342 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 FAM210BQ96KR6 192 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 PARP12Q9H0J9 701 aaKnown RBP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 SEMA5BQ9P283 1151 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 KCNK6Q9Y257 313 aa11.33□□□□□ -0.6
FOXN3-201ENST00000261302 ZNF443Q9Y2A4 671 aaPredicted RBP11.33□□□□□ -0.6
FOXN3-201ENST00000261302 SPTBN5Q9NRC6 3674 aaKnown RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 K7EPK0 472 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 POU2F2P09086 479 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 SLC6A6P31641 620 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 UBE2KP61086 200 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 SLC35A1P78382 337 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 DLK1P80370 383 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 OR4C11Q6IEV9 310 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 TEX38Q6PEX7 206 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 LSRQ86X29 649 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 C9orf40Q8IXQ3 194 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 FAM71E2Q8N5Q1 922 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 ZNF248Q8NDW4 579 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 OR4S1Q8NGB4 309 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 FAM174AQ8TBP5 190 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 RNASE8Q8TDE3 154 aaKnown RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 RNF128Q8TEB7 428 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 FAM122AQ96E09 287 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 URM1Q9BTM9 101 aaKnown RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 SLC26A1Q9H2B4 701 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 FRRS1LQ9P0K9 344 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 LRFN1Q9P244 771 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 USP36Q9P275 1121 aaKnown RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 A0A0A6YYH2 397 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 A6NJ64 397 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 UPK3AO75631 287 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 TACSTD2P09758 323 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 PGA4P0DJD7 388 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 PGA5P0DJD9 388 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 TLX1P31314 330 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 LSSP48449 732 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 ZNF627Q7L945 461 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 POC1AQ8NBT0 407 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 OR52N4Q8NGI2 321 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 MFSD8Q8NHS3 518 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 METTL21AQ8WXB1 218 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM106AQ96A25 262 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 RSPRY1Q96DX4 576 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 C2orf50Q96LR7 162 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 MENTQ9BUN1 341 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 MS4A8Q9BY19 250 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 GSX1Q9H4S2 264 aaPredicted RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 FBXL17Q9UF56 701 aa11.32□□□□□ -0.6
FOXN3-201ENST00000261302 STRAPQ9Y3F4 350 aaKnown RBP11.32□□□□□ -0.6
FOXN3-201ENST00000261302 OR2AG2A6NM03 316 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 FCMRO60667 390 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 LEFTY1O75610 366 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 CBR3O75828 277 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 C1orf105O95561 183 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 HNRNPA1P09651 372 aaKnown RBP eCLIP11.31□□□□□ -0.64e-7■■■■□ 19.5
FOXN3-201ENST00000261302 OR4A8P0C604 315 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 RAC2P15153 192 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 CAMLGP49069 296 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 H3F3AP84243 136 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 IQCJQ1A5X6 159 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 TANGO2Q6ICL3 276 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 Q6ZVU0 165 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 MDGA2Q7Z553 956 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 TCEAL8Q8IYN2 117 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 LILRA3Q8N6C8 439 aaPredicted RBP11.31□□□□□ -0.6
FOXN3-201ENST00000261302 ZNRF4Q8WWF5 429 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 ARSGQ96EG1 525 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 CHST11Q9NPF2 352 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 ZNF346Q9UL40 294 aaKnown RBP11.31□□□□□ -0.6
FOXN3-201ENST00000261302 OR51B4Q9Y5P0 310 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 PRUNE2Q8WUY3 3088 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 HSD17B6O14756 317 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 SIAH2O43255 324 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 TCF21O43680 179 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 PGA3P0DJD8 388 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 FOLR1P15328 257 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 SPINT3P49223 89 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 TMEM128Q5BJH2 165 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 C1orf87Q8N0U7 546 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 KDM8Q8N371 416 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 TTC9BQ8N6N2 239 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 C12orf76Q8N812 135 aaPredicted RBP11.31□□□□□ -0.6
FOXN3-201ENST00000261302 ADPRHL1Q8NDY3 354 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 OR1N1Q8NGS0 311 aa11.31□□□□□ -0.6
FOXN3-201ENST00000261302 OR1P1Q8NH06 330 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms