RNA–Protein interactions for RNA: ENST00000249837.7

VPS13C-201, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPS13C, Length 13,300 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-201ENST00000249837 IL10RAQ13651 578 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 FAM53BQ14153 422 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 LYG2Q86SG7 212 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 C20orf196Q8IYI0 205 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 PPP1R1CQ8WVI7 109 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 LIN37Q96GY3 246 aaPredicted RBP4.15□□□□□ -1.74
VPS13C-201ENST00000249837 ZFP57Q9NU63 452 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 BDP1A6H8Y1 2624 aa4.15□□□□□ -1.74
VPS13C-201ENST00000249837 IGHV3-15A0A0B4J1V0 119 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 TMEM272A0A1B0GTI8 110 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PHF1O43189 567 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 OR2F2O95006 317 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 DCDP81605 110 aaKnown RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 MFAP5Q13361 173 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 OR2F1Q13607 317 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 HNF4GQ14541 408 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ANKRD16Q6P6B7 361 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 GALNT16Q8N428 558 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 OR14K1Q8NGZ2 314 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 HAS2Q92819 552 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PBOV1Q9GZY1 135 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PCDHGA9Q9Y5G4 932 aaKnown RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF354AO60765 605 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 IKZF1Q13422 519 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 DOC2BQ14184 412 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ETFDHQ16134 617 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 Q6ZRG5 221 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ARHGAP5-AS1Q96IT6 56 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF2Q9BSG1 426 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 CA10Q9NS85 328 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 SMCO3A2RU48 225 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 XRCC2O43543 280 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF141Q15928 474 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 HIST2H3PS2Q5TEC6 136 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 NPSR1Q6W5P4 371 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 DGAT2L6Q6ZPD8 337 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ETFBKMTQ8IXQ9 262 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PRSS35Q8N3Z0 413 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 NANPQ8TBE9 248 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 RNF128Q8TEB7 428 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 FAM86C1Q9NVL1 165 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 BPNT1O95861 308 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 IGKV1D-16P01601 117 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 EDN3P14138 238 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZP3P21754 424 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 LAMTOR1Q6IAA8 161 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 FBXW12Q6X9E4 464 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 SLC38A9Q8NBW4 561 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 RNF141Q8WVD5 230 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF764Q96H86 408 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 MS4A3Q96HJ5 214 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PFDN5Q99471 154 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ELF5Q9UKW6 265 aaPredicted RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ANKRD20A5PA0PJZ0 165 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 B3GALNT1O75752 331 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 WNT11O96014 354 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF117Q03924 483 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 HAGHQ16775 308 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 Q6ZS52 159 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 NAXDQ8IW45 347 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF100Q8IYN0 542 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 SUCNR1Q9BXA5 334 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 OR6C76A6NM76 312 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 CTSBP07858 339 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 CNR1P21554 472 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PRR18Q8N4B5 295 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 OR52N4Q8NGI2 321 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 EXOSC3Q9NQT5 275 aaKnown RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PURGQ9UJV8 347 aaKnown RBP4.15□□□□□ -1.75
VPS13C-201ENST00000249837 DTX4Q9Y2E6 619 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 PCDHGA1Q9Y5H4 931 aa4.15□□□□□ -1.75
VPS13C-201ENST00000249837 SPG11Q96JI7 2443 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CXorf51AA0A1B0GTR3 108 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 DCTN6O00399 190 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SHOXO15266 292 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 EPPINO95925 133 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZNF44P15621 663 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 LTC4SQ16873 150 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SP6Q3SY56 376 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 MISPQ8IVT2 679 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 UBL7Q96S82 380 aaPredicted RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SPIN2AQ99865 258 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 SPIN2BQ9BPZ2 258 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FOXQ1Q9C009 403 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FRRS1LQ9P0K9 344 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PCDHB10Q9UN67 800 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FLVCR1Q9Y5Y0 555 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 QDPRP09417 244 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FAHP16930 419 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 LAP3P28838 519 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PRSS12P56730 875 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 FOXL2P58012 376 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.14□□□□□ -1.75
VPS13C-201ENST00000249837 NAA40Q86UY6 237 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 OR5L1Q8NGL2 311 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 AMELYQ99218 206 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 PADI1Q9ULC6 663 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 TNCP24821 2201 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 CTAG2O75638 210 aa4.14□□□□□ -1.75
VPS13C-201ENST00000249837 KIR3DL2P43630 455 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms