RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 NXNL2Q5VZ03 156 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SLC16A9Q7RTY1 509 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 PEG10Q86TG7 708 aaKnown RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 GID4Q8IVV7 300 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF283Q8N7M2 679 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 CELF2-AS1Q8N7Q2 184 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 LINC01356Q8N9X3 169 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 BHLHE23Q8NDY6 225 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 OR10AD1Q8NGE0 317 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 OR52H1Q8NGJ2 320 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 CCL17Q92583 94 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SPSB4Q96A44 273 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 AMELYQ99218 206 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 SOX7Q9BT81 388 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 REPIN1Q9BWE0 567 aaKnown RBP10.81□□□□□ -0.68
VPREB3-201ENST00000248948 YIPF3Q9GZM5 350 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 NIPAL2Q9H841 368 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 JMJD1CQ15652 2540 aa10.81□□□□□ -0.68
VPREB3-201ENST00000248948 B4DSR2 109 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 MLNRO43193 412 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 LMX1BO60663 402 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 H2BFMP0C1H6 154 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 PCMT1P22061 227 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 CFL1P23528 166 aaKnown RBP10.8□□□□□ -0.68
VPREB3-201ENST00000248948 EPHA2P29317 976 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 GATA4P43694 442 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 MMP16P51512 607 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 PRKXP51817 358 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 EFNB1P98172 346 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 CHRFAM7AQ494W8 412 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 SPATC1Q76KD6 591 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 PRSS45Q7RTY3 260 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 NAA40Q86UY6 237 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 OR2AE1Q8NHA4 323 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 TMEM163Q8TC26 289 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 ITLN1Q8WWA0 313 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 MEGF10Q96KG7 1140 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 CNN2Q99439 309 aaKnown RBP10.8□□□□□ -0.68
VPREB3-201ENST00000248948 PKP2Q99959 881 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 RGCCQ9H4X1 137 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 TMEM106BQ9NUM4 274 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 TMEM100Q9NV29 134 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 USE1Q9NZ43 259 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 MRPL15Q9P015 296 aaKnown RBP10.8□□□□□ -0.68
VPREB3-201ENST00000248948 LAMP5Q9UJQ1 280 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 PPP1R3CQ9UQK1 317 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 TMEM14AQ9Y6G1 99 aa10.8□□□□□ -0.68
VPREB3-201ENST00000248948 SAC3D1A6NKF1 404 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 CD300LBA8K4G0 201 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ALPLP05186 524 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ANXA2P07355 339 aaKnown RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 SLC2A1P11166 492 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ALOX5APP20292 161 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 HNF1AP20823 631 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ANOS1P23352 680 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 DDOSTP39656 456 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 CD200P41217 278 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 RAD23AP54725 363 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 DVL1P1P54792 670 aaPredicted RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF121P58317 390 aaPredicted RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 MVKQ03426 396 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 SNCBQ16143 134 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 TIGD6Q17RP2 521 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF181Q2M3W8 571 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 SPRNQ5BIV9 151 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 AVPI1Q5T686 147 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 AADACL4Q5VUY2 407 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 KCTD18Q6PI47 426 aaPredicted RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 DEGS2Q6QHC5 323 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 GLCCI1Q86VQ1 547 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 KLBQ86Z14 1044 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 OR51F2Q8NH61 342 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 SPRYD4Q8WW59 207 aaPredicted RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ERGIC1Q969X5 290 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 SIGLEC11Q96RL6 698 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 MNTQ99583 582 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 TEAD3Q99594 435 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 GAL3ST1Q99999 423 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ADAT1Q9BUB4 502 aaKnown RBP10.79□□□□□ -0.68
VPREB3-201ENST00000248948 NARFLQ9H6Q4 476 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF665Q9H7R5 613 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 GCM1Q9NP62 436 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 KLHDC2Q9Y2U9 406 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 LRP12Q9Y561 859 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 ORC6Q9Y5N6 252 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 NPTNQ9Y639 398 aa10.79□□□□□ -0.68
VPREB3-201ENST00000248948 hCG_38984A0A1B0GV85 526 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 GGT3PA6NGU5 568 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 EI24O14681 340 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 PHYHO14832 338 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 WNT9BO14905 357 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 TBX1O43435 398 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 GMDSO60547 372 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 FSTL3O95633 263 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 PTBP3O95758 552 aaKnown RBP10.78□□□□□ -0.68
VPREB3-201ENST00000248948 TGFAP01135 160 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 IGHV2-70P01814 119 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 IGHV2-5P01817 119 aa10.78□□□□□ -0.68
VPREB3-201ENST00000248948 MSMBP08118 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms