RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 SSR4P51571 173 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 ZNF121P58317 390 aaPredicted RBP13.96□□□□□ -0.17
LRFN1-201ENST00000248668 C2orf68Q2NKX9 166 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 SLC22A6Q4U2R8 563 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 FAM57BQ71RH2 274 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 GALNT16Q8N428 558 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 PCDHB16Q9NRJ7 776 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 ARID1AO14497 2285 aa13.96□□□□□ -0.17
LRFN1-201ENST00000248668 IGLV3-32A0A0A0MS00 114 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 CREBL2O60519 120 aaPredicted RBP13.96□□□□□ -0.18
LRFN1-201ENST00000248668 FAUP35544 74 aaKnown RBP13.96□□□□□ -0.18
LRFN1-201ENST00000248668 TSPAN5P62079 268 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 GABREP78334 506 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 CSRP2Q16527 193 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 SCGB2B2Q4G0G5 96 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 STEAP1BQ6NZ63 245 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 TMPPEQ6ZT21 453 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 STPG2Q8N412 459 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 FADS6Q8N9I5 356 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 SEH1LQ96EE3 360 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 OXGR1Q96P68 337 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 SORCS2Q96PQ0 1159 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 WDR54Q9H977 334 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 NXT1Q9UKK6 140 aaKnown RBP13.96□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF175Q9Y473 711 aa13.96□□□□□ -0.18
LRFN1-201ENST00000248668 OR2M5A3KFT3 312 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 NDUFS6O75380 124 aaKnown RBP13.95□□□□□ -0.18
LRFN1-201ENST00000248668 IFNA7P01567 189 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 BDKRB2P30411 391 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 PHYHD1Q5SRE7 291 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 OPN5Q6U736 354 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 HDDC2Q7Z4H3 204 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 YRDCQ86U90 279 aaKnown RBP13.95□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF283Q8N7M2 679 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 C15orf40Q8WUR7 153 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 EXO5Q9H790 373 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 C19orf67A6NJJ6 358 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 TNFSF11O14788 317 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 TGM6O95932 706 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 CSF1P09603 554 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 AKAIN1P0CW23 69 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 HOXA6P31267 233 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 FOLR3P41439 243 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 ZXDAP98168 799 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 ZFP36L1Q07352 338 aaKnown RBP13.95□□□□□ -0.18
LRFN1-201ENST00000248668 RBMS2Q15434 407 aaKnown RBP13.95□□□□□ -0.18
LRFN1-201ENST00000248668 CLLU1Q5K131 121 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 CD163Q86VB7 1156 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 GABRG1Q8N1C3 465 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 OR8B12Q8NGG6 310 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 OR2Y1Q8NGV0 311 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 PROK2Q9HC23 129 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 GPR84Q9NQS5 396 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 CUL9Q8IWT3 2517 aa13.95□□□□□ -0.18
LRFN1-201ENST00000248668 F5H5K5 113 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ONECUT2O95948 504 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 FSTP19883 344 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 PRSS12P56730 875 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 C4orf46Q504U0 113 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.94□□□□□ -0.18
LRFN1-201ENST00000248668 GVQW1Q8N7I0 195 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 TMEM105Q8N8V8 129 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 RHBDD1Q8TEB9 315 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 NUDCD2Q8WVJ2 157 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF416Q9BWM5 594 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 SCP2D1Q9UJQ7 156 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 EDARQ9UNE0 448 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 SLC5A6Q9Y289 635 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 KCNMB2Q9Y691 235 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 LOC102723996A0A087X1L8 192 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 AQP7P3A6NL99 342 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF878C9JN71 531 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 G3V3Q6 166 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 AMY2AP04746 511 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ISG15P05161 165 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF20P17024 532 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 SLC6A9P48067 706 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF101Q8IZC7 436 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 CLEC1AQ8NC01 280 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 OR1M1Q8NGA1 313 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 OR5D18Q8NGL1 313 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 RBM24Q9BX46 236 aaKnown RBP13.94□□□□□ -0.18
LRFN1-201ENST00000248668 SDHAF2Q9NX18 166 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 NPIPB13A6NJU9 1138 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 NPIPB4C9JG80 1138 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 E9PLN8 166 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 PRAF2O60831 178 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 TMEM127O75204 238 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 RAB3DO95716 219 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 APOC3P02656 99 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 DUSP3P51452 185 aaPredicted RBP13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ATRAIDQ6UW56 229 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 ZNF813Q6ZN06 617 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 OR6X1Q8NH79 312 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 GPX8Q8TED1 209 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 CXorf58Q96LI9 332 aa13.94□□□□□ -0.18
LRFN1-201ENST00000248668 STK17BO94768 372 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 TCN2P20062 427 aa13.93□□□□□ -0.18
LRFN1-201ENST00000248668 EIF1P41567 113 aaKnown RBP13.93□□□□□ -0.18
LRFN1-201ENST00000248668 CX3CR1P49238 355 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms