RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 APOBEC1P41238 236 aaKnown RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 POU3F4P49335 361 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 P2RX3P56373 397 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ACTBP60709 375 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ACTG1P63261 375 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CFHR1Q03591 330 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 PUDPQ08623 228 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 C17orf67Q0P5P2 114 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SNTA1Q13424 505 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 LINC00303Q3SY05 128 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 LGALSLQ3ZCW2 172 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 VWA2Q5GFL6 755 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CLLU1Q5K131 121 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SLC25A25Q6KCM7 469 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 RHBDD2Q6NTF9 364 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 MTFR2Q6P444 385 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ZNF704Q6ZNC4 412 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 Q6ZTK2 550 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 HDDC2Q7Z4H3 204 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CDH26Q8IXH8 852 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 NKAIN3Q8N8D7 197 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 OR6M1Q8NGM8 313 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 OR10AC1Q8NH08 325 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ASB5Q8WWX0 329 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 LINC00476Q8WZB0 136 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 FAM3DQ96BQ1 224 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SLC25A36Q96CQ1 311 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ABHD6Q9BV23 337 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 POTEKPQ9BYX7 375 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 ALX4Q9H161 411 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 METTL17Q9H7H0 456 aaPredicted RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 FGF21Q9NSA1 209 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 MRPL15Q9P015 296 aaKnown RBP6.96□□□□□ -1.29
CXCR4-201ENST00000241393 FLVCR2Q9UPI3 526 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 DHDHQ9UQ10 334 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 R4GMQ9 66 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 CDH23Q9H251 3354 aa6.96□□□□□ -1.29
CXCR4-201ENST00000241393 SEC16AO15027 2179 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 A0A087WV48 116 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 A0A1B0GTH9 108 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 OR2M5A3KFT3 312 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 SRSF10O75494 262 aaKnown RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 CYC1P08574 325 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 NPSP0C0P6 89 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 GABRA1P14867 456 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 PRSS3P35030 304 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 RAD52P43351 418 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF81P51508 661 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 RPS15P62841 145 aaKnown RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 ACY1Q03154 408 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 EIF2B1Q14232 305 aaKnown RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 MPPED2Q15777 294 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 PCGF3Q3KNV8 242 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 STPG1Q5TH74 334 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM244Q5VVB8 128 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM225Q6GV28 225 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 H1FNTQ75WM6 255 aaPredicted RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 COX15Q7KZN9 410 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 SLC36A1Q7Z2H8 476 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 TDHQ8IZJ6 230 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 DEFB119Q8N690 84 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 C11orf44Q8N8P7 122 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 OR51D1Q8NGF3 324 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 OR51A4Q8NGJ6 313 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 OR8K3Q8NH51 312 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 CEP76Q8TAP6 659 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 GPX8Q8TED1 209 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF747Q9BV97 191 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 SEPSECSQ9HD40 501 aaKnown RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 MYOZ1Q9NP98 299 aaPredicted RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 PRMT8Q9NR22 394 aaPredicted RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 PIPOXQ9P0Z9 390 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 MGAT4CQ9UBM8 478 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 EIF3KQ9UBQ5 218 aaKnown RBP6.96□□□□□ -1.3
CXCR4-201ENST00000241393 UBQLN2Q9UHD9 624 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 HHLA2Q9UM44 414 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 PCDHGA5Q9Y5G8 931 aa6.96□□□□□ -1.3
CXCR4-201ENST00000241393 CPAMD8Q8IZJ3 1885 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 IGLV3-32A0A0A0MS00 114 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 A0A1W2PNV4 684 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 A0A1W2PPC1 479 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 LOC390937A0A1W2PQ73 354 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 PLSCR5A0PG75 271 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 OR6C65A6NJZ3 312 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 HMSDA8MTL9 139 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 LEUTXA8MZ59 168 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SDC3O75056 442 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 TSC22D2O75157 780 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 PNPP00491 289 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 UBCP0CG48 685 aaKnown RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 TMIGD3P0DMS9 266 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF823P16415 610 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 RPS27P42677 84 aaKnown RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 ARRB1P49407 418 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 AP2S1P53680 142 aaPredicted RBP6.95□□□□□ -1.3
CXCR4-201ENST00000241393 STARD6P59095 220 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 GRK1Q15835 563 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 C2orf76Q3KRA6 126 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 SLC25A53Q5H9E4 307 aa6.95□□□□□ -1.3
CXCR4-201ENST00000241393 WDR45BQ5MNZ6 344 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms