RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 TXNIPQ9H3M7 391 aa12.04□□□□□ -0.48
NEK9-201ENST00000238616 KLF13Q9Y2Y9 288 aaPredicted RBP12.04□□□□□ -0.48
NEK9-201ENST00000238616 GBF1Q92538 1859 aa12.04□□□□□ -0.48
NEK9-201ENST00000238616 FURINP09958 794 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 LIM2P55344 173 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 SYT6Q5T7P8 510 aaPredicted RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 DHRS11Q6UWP2 260 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 VRK3Q8IV63 474 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 SLC25A22Q9H936 323 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 OR5H8P0DN80 308 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 HTR1FP30939 366 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 HFEQ30201 348 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 OR10V1Q8NGI7 309 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 A0A1W2PR80 420 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 M0R082 166 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 SPCS2Q15005 226 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 PDXPQ96GD0 296 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 PSENENQ9NZ42 101 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 FABP9Q0Z7S8 132 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 DGAT2L7PQ6IED9 249 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 ADAM5Q6NVV9 412 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 FA2HQ7L5A8 372 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 TMEM231Q9H6L2 316 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 LOXL2Q9Y4K0 774 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 PLXND1Q9Y4D7 1925 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 APELAP0DMC3 54 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 INSM1Q01101 510 aaPredicted RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 SMIM21Q3B7S5 101 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 Q96M85 177 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 CNOT2Q9NZN8 540 aaKnown RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 SPINK9Q5DT21 86 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 ZNF788Q6ZQV5 615 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 LSRQ86X29 649 aaPredicted RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 KMT5CQ86Y97 462 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 PGBD5Q8N414 524 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 SLC7A6Q92536 515 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 NOL4LQ96MY1 436 aaPredicted RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 KLK4Q9Y5K2 254 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 GGNBP1Q5YKI7 109 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 RPUSD3Q6P087 351 aaKnown RBP12.03□□□□□ -0.48
NEK9-201ENST00000238616 GLCCI1Q86VQ1 547 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 OR2A1Q8NGT9 310 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 GPR84Q9NQS5 396 aa12.03□□□□□ -0.48
NEK9-201ENST00000238616 ZNF727A8MUV8 499 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 DEFB108AA8MXU0 73 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 J3QR89 54 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 M0R135 149 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 CTDSP2O14595 271 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 ICOSLGO75144 302 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 PIGPP57054 158 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 RBPMS2Q6ZRY4 209 aaKnown RBP12.02□□□□□ -0.48
NEK9-201ENST00000238616 GRINAQ7Z429 371 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 DYNLRB2Q8TF09 96 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 TSLPQ969D9 159 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 ZNF799Q96GE5 643 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 SEC22CQ9BRL7 303 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 MAGT1Q9H0U3 335 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 FBXL4Q9UKA2 621 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 C9orf172C9J069 976 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 DUS4LO95620 317 aaKnown RBP12.02□□□□□ -0.48
NEK9-201ENST00000238616 CD14P08571 375 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 TOR2AQ5JU69 321 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 RHOUQ7L0Q8 258 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 MRPL10Q7Z7H8 261 aaKnown RBP12.02□□□□□ -0.48
NEK9-201ENST00000238616 TTC9Q92623 222 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 HDAC8Q9BY41 377 aa12.02□□□□□ -0.48
NEK9-201ENST00000238616 STRAPQ9Y3F4 350 aaKnown RBP12.02□□□□□ -0.48
NEK9-201ENST00000238616 EPHA2P29317 976 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 HOXC13P31276 330 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 HRH1P35367 487 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 NPY5RQ15761 445 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 FDX2Q6P4F2 183 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 ANKRD60Q9BZ19 345 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 USP22Q9UPT9 525 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 ARFGEF1Q9Y6D6 1849 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 FPR3P25089 353 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 MKRN2Q9H000 416 aaKnown RBP12.02□□□□□ -0.49
NEK9-201ENST00000238616 ZNF586Q9NXT0 402 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 PATJQ8NI35 1801 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 CYC1P08574 325 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 CPN1P15169 458 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 B4GALT1P15291 398 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 BMP5P22003 454 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 C21orf58P58505 322 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 LRRC15Q8TF66 581 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 NDRG4Q9ULP0 352 aaKnown RBP12.02□□□□□ -0.49
NEK9-201ENST00000238616 A0A1W2PRD5 423 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 A0A1W2PRF3 423 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 A0A1W2PRM7 423 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 TRIM23P36406 574 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 C17orf99Q6UX52 265 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 CCDC190Q86UF4 302 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 ZNF384Q8TF68 577 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 TIMM10BQ9Y5J6 103 aa12.02□□□□□ -0.49
NEK9-201ENST00000238616 CDX4O14627 284 aaPredicted RBP12.01□□□□□ -0.49
NEK9-201ENST00000238616 PI3P19957 117 aa12.01□□□□□ -0.49
NEK9-201ENST00000238616 IVDP26440 423 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms