RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RNASEK-C17orf49H0YIS7 233 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 SOX1O00570 391 aaPredicted RBP13.8□□□□□ -0.2
DDX55-201ENST00000238146 SFT2D2O95562 160 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 TTRP02766 147 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 IGKV3-11P04433 115 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 H2BFMP0C1H6 154 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 SFTA3P0C7M3 94 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 CD1CP29017 333 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 IL12BP29460 328 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 GSK3AP49840 483 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 MMP16P51512 607 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 POLR2HP52434 150 aaKnown RBP13.8□□□□□ -0.2
DDX55-201ENST00000238146 DEGS2Q6QHC5 323 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 COX15Q7KZN9 410 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 ANGPTL5Q86XS5 388 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.8□□□□□ -0.2
DDX55-201ENST00000238146 WDFY1Q8IWB7 410 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 SLC5A7Q9GZV3 580 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 LANCL2Q9NS86 450 aa13.8□□□□□ -0.2
DDX55-201ENST00000238146 ALG1L2C9J202 215 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 SCGNO76038 276 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 GLAP06280 429 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 PI3P19957 117 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 IL11P20809 199 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 LPAR6P43657 344 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 EMP2P54851 167 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 SUPT4H1P63272 117 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 HABP2Q14520 560 aaPredicted RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 ELAVL1Q15717 326 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 SLC29A4Q7RTT9 530 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 MISPQ8IVT2 679 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 OR13C9Q8NGT0 318 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 OR51F2Q8NH61 342 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 TSLPQ969D9 159 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 CYYR1Q96J86 154 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 OR10C1Q96KK4 312 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 TBL1XR1Q9BZK7 514 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 FOXQ1Q9C009 403 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 FAM206AQ9NX38 181 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 PCDHGA1Q9Y5H4 931 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 FLVCR1Q9Y5Y0 555 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 A0A0A6YYD4 124 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 CEACAM18A8MTB9 384 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 SNRPEP62304 92 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 RBM39Q14498 530 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 ANKRD55Q3KP44 614 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 FAM109BQ6ICB4 259 aaPredicted RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 NUBPLQ8TB37 319 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 ZNF721Q8TF20 911 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 TCTN2Q96GX1 697 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 NUDT16L1Q9BRJ7 211 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 LPAR5Q9H1C0 372 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 RNF122Q9H9V4 155 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 SLC22A11Q9NSA0 550 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 ZMAT5Q9UDW3 170 aaKnown RBP13.79□□□□□ -0.2
DDX55-201ENST00000238146 WIF1Q9Y5W5 379 aa13.79□□□□□ -0.2
DDX55-201ENST00000238146 SYT7O43581 403 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 LRP3O75074 770 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 DDAH2O95865 285 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 GABRA4P48169 554 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 RAB32Q13637 225 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 PLAC9Q5JTB6 97 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 VAX1Q5SQQ9 334 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 RNF133Q8WVZ7 376 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 ZNF285Q96NJ3 590 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 SEC61A2Q9H9S3 476 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 DHCR7Q9UBM7 475 aaKnown RBP13.78□□□□□ -0.2
DDX55-201ENST00000238146 FBLN5Q9UBX5 448 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 A0A1W2PQD3 144 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 C9JQL5 133 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 TSPAN2O60636 221 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 AHSA1O95433 338 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 CSTBP04080 98 aaKnown RBP13.78□□□□□ -0.2
DDX55-201ENST00000238146 CD5P06127 495 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 FOLR2P14207 255 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 ZNF101Q8IZC7 436 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 ARRDC1Q8N5I2 433 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 TMEM104Q8NE00 496 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 SPACA5Q96QH8 159 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 ANAPC10Q9UM13 185 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 HS3ST3A1Q9Y663 406 aa13.78□□□□□ -0.2
DDX55-201ENST00000238146 B4DGG1 531 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 FCGR3AP08637 254 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 ZNF93P35789 620 aaPredicted RBP13.77□□□□□ -0.2
DDX55-201ENST00000238146 CLDN6P56747 220 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 HTRA3P83110 453 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 SMAD2Q15796 467 aaKnown RBP13.77□□□□□ -0.2
DDX55-201ENST00000238146 RPL7L1Q6DKI1 246 aaKnown RBP13.77□□□□□ -0.2
DDX55-201ENST00000238146 OR5D14Q8NGL3 314 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 RTBDNQ9BSG5 229 aaPredicted RBP13.77□□□□□ -0.2
DDX55-201ENST00000238146 SLC26A1Q9H2B4 701 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 CERS4Q9HA82 394 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 EDARQ9UNE0 448 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 TDRD6O60522 2096 aaKnown RBP13.77□□□□□ -0.2
DDX55-201ENST00000238146 SEC16AO15027 2179 aa13.77□□□□□ -0.2
DDX55-201ENST00000238146 FTCDNL1E5RQL4 147 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 MS4A18H0YCH9 400 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 SOCS1O15524 211 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 MED6O75586 246 aa13.77□□□□□ -0.21
DDX55-201ENST00000238146 SERPINA5P05154 406 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms